Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0688 |
Symbol | |
ID | 8251776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 796519 |
End bp | 796998 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934337 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_003090972 |
Protein GI | 255530600 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT GGATTGATAA AACATTTGTG CTTGCAGGGC TGTTGGTGTT GTTAAACCTG GCAGCCTGTG GCCAGCAGCC TAAAAAAGAG GATATAAAAA AAGCAACCAA TACTATGGAA TGGAATAAAT TAACTAAGGA AGAAGAAGAT GTGATTGTAC GTAAGGGTAC AGAATACCCG GGCACAGGGA AGTTGTTGAA CAATAAGGAG AAAGGGACTT ATGTTTGTAA GCGCTGTAAT GCGCCGCTGT ACCGTTCGGA ATCTAAATTT GAATCGCATT GCGGATGGCC CAGTTTTGAC GATGAAATTA AAGGTGCTGT AGAAAGAATT CCTGATGCTG ATGGAATGCG AACTGAAATT GTATGTGCAA ATTGTAAGGC ACATTTGGGC CATGTTTTTT TAGGAGAAGG CTTTACCGCT AAGAACACCC GCAACTGTGT AAACTCTATC TCTATGAATT TTGTGCCTGA TAAGAAATAA
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Protein sequence | MKTWIDKTFV LAGLLVLLNL AACGQQPKKE DIKKATNTME WNKLTKEEED VIVRKGTEYP GTGKLLNNKE KGTYVCKRCN APLYRSESKF ESHCGWPSFD DEIKGAVERI PDADGMRTEI VCANCKAHLG HVFLGEGFTA KNTRNCVNSI SMNFVPDKK
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