Gene Phep_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0688 
Symbol 
ID8251776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp796519 
End bp796998 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content41% 
IMG OID644934337 
Productmethionine sulfoxide reductase B 
Protein accessionYP_003090972 
Protein GI255530600 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT GGATTGATAA AACATTTGTG CTTGCAGGGC TGTTGGTGTT GTTAAACCTG 
GCAGCCTGTG GCCAGCAGCC TAAAAAAGAG GATATAAAAA AAGCAACCAA TACTATGGAA
TGGAATAAAT TAACTAAGGA AGAAGAAGAT GTGATTGTAC GTAAGGGTAC AGAATACCCG
GGCACAGGGA AGTTGTTGAA CAATAAGGAG AAAGGGACTT ATGTTTGTAA GCGCTGTAAT
GCGCCGCTGT ACCGTTCGGA ATCTAAATTT GAATCGCATT GCGGATGGCC CAGTTTTGAC
GATGAAATTA AAGGTGCTGT AGAAAGAATT CCTGATGCTG ATGGAATGCG AACTGAAATT
GTATGTGCAA ATTGTAAGGC ACATTTGGGC CATGTTTTTT TAGGAGAAGG CTTTACCGCT
AAGAACACCC GCAACTGTGT AAACTCTATC TCTATGAATT TTGTGCCTGA TAAGAAATAA
 
Protein sequence
MKTWIDKTFV LAGLLVLLNL AACGQQPKKE DIKKATNTME WNKLTKEEED VIVRKGTEYP 
GTGKLLNNKE KGTYVCKRCN APLYRSESKF ESHCGWPSFD DEIKGAVERI PDADGMRTEI
VCANCKAHLG HVFLGEGFTA KNTRNCVNSI SMNFVPDKK