| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0666 |
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| Symbol | |
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| ID | 8251754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 774985 |
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| End bp | 776862 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934315 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003090950 |
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| Protein GI | 255530578 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.477317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACC CATTTAGTAA ATTGGGGATA AGTGATGACG TTGTTAATGC TGTAAAGGAT
TTAGGTTTCG AAAATCCAAC ACCTATTCAG GAACAAAGTA TTCCTGTGCT GTTAGAGGGC
AATAACGATT TTGTTGGTTT GGCCCAAACA GGAACAGGAA AAACAGCCGC ATTTGGTTTG
CCGCTGTTAG AATTGATAGA CTTCAAGAGC AATAAGCCTC AGGCATTGAT TTTATGCCCA
ACAAGAGAGC TCTGCTTGCA GATTACTAGC GACATCAAGA ATTTCTCAAA GAACACCTCT
GGTGCTAATG TTGTAGCCGT TTATGGCGGT GCAAACATTA TGCAGCAATT GCGTGAAATT
AGAAACGGTG TACAAATTGT AGTGGCTACA CCGGGCCGTA TGTTAGACAT TATTGGCCGT
AAGGCTATAG ATTTCACCAA TGTGAAATAT GTAGTACTTG ACGAGGCTGA CGAAATGCTG
AACATGGGCT TCCAGGAAGA CATTAACGAC ATTTTGTCTA CTACACCTGA CGACAAAAAA
ACCTGGTTAT TCTCGGCTAC TATGCCTCCT GAAGTAAGGA GAATAGCTAA AAACTACATG
GACTCACCGG TTGAGCTGAC CATGGGTACG AAAAACACGG GTAACGTAAA TATTGAGCAT
GAGTACTACA TTGTACGTGC AAGAGATAAA TACGCTGCTT TAAAACGCAT TGTGGATTTC
AATCCGGAAA TTTTTGCAGT AGTTTTCTGT AAAACCAAAC TGGATACGCA GGATGTGGCT
GAACACCTGA TCAAAGACGG CTACAATGCT GATGCTTTGC ATGGCGACCT TTCTCAGCAA
CAACGCGACA AGGTCATGCA ACGTTTCCGC GACCGCAACA TGCAATTGTT AATTGCAACT
GATGTAGCTG CACGTGGTAT AGACGTAAAC AATGTAACTC ACGTAATCAA TTACTCTTTG
CCGGATGAAA TTGAAAGTTA TACCCACCGT AGCGGCCGTA CCGGTCGTGC TGGTAAAACG
GGTATTTCCA TCTGTATCGT AAACTCGAAA GAGATTGGCA AAATTCGTCA GATTGAAAGG
ATCATAGGAA AGCAGTTTAC CAAAGCGGCC CTGCCTACAG GTTTCGACGT TTGCGAAAAA
CAATTGTTTG CCCTGGTACA CAAGGTACAC AATGTAGAAG TAAACGAAAA CCAGATTGAG
CAATACATCC CCAGAATTAT GGATGAATTT GCTGAACTGA GCAAAGAGGA CGTGATCAAG
CGTTTTGCAT CTTTAGAGTT TAACCGCTTT TTAGAGTATT ACAAAAACGC ACCCGACCTG
AACTCTTCTA CAGACGAGCG CGGTGAACGT GGCGAGCGCG GTGAACGTGG CGAGAGAGGA
TCAAGAACGA GCGAAGGTTA TACCCGTCTG TTCATTAACC TGGGTTCTGT TGACGATTTT
ACCCGTGGCG ACCTCTTGTC TTTTGTTTGC AACAATGGTA AGATCAGCGG AAAAGCAATT
GGCAAGATTG ACCTGAAAGG GGTTTATTCT TTCTTTGAGG TTGAAAATGC AACTGTGGAA
TCTTTATTCA ACAACTTTAA AGGCGTTGAA TTTAACAACC GCGGAGTAAG GATCGAAAAA
ACTGCTGATA CTGATGGCGG CGGCGGTGGC CGTAGCCGTG GTGGCTTTGG TGGCGGTGGC
AGACGCGAAG GCGGCGGCTA CGGGGGCGGA AGAAGCGGCG GTGCTGAGCG AAAAAGCTAT
GGCAGCGGAA GACGTGAAGG CGGAGAACGT AGCAGTGGCG GTGGTTTCAG GGATTTTTCC
GGAAGGAGCC GTGAAGACAG AGGTGCTGGT GGTGCCGGCA GACGCGAAGG CGGAAGCGAC
AGAAGGCGCA GATCATAA
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| Protein sequence | MINPFSKLGI SDDVVNAVKD LGFENPTPIQ EQSIPVLLEG NNDFVGLAQT GTGKTAAFGL
PLLELIDFKS NKPQALILCP TRELCLQITS DIKNFSKNTS GANVVAVYGG ANIMQQLREI
RNGVQIVVAT PGRMLDIIGR KAIDFTNVKY VVLDEADEML NMGFQEDIND ILSTTPDDKK
TWLFSATMPP EVRRIAKNYM DSPVELTMGT KNTGNVNIEH EYYIVRARDK YAALKRIVDF
NPEIFAVVFC KTKLDTQDVA EHLIKDGYNA DALHGDLSQQ QRDKVMQRFR DRNMQLLIAT
DVAARGIDVN NVTHVINYSL PDEIESYTHR SGRTGRAGKT GISICIVNSK EIGKIRQIER
IIGKQFTKAA LPTGFDVCEK QLFALVHKVH NVEVNENQIE QYIPRIMDEF AELSKEDVIK
RFASLEFNRF LEYYKNAPDL NSSTDERGER GERGERGERG SRTSEGYTRL FINLGSVDDF
TRGDLLSFVC NNGKISGKAI GKIDLKGVYS FFEVENATVE SLFNNFKGVE FNNRGVRIEK
TADTDGGGGG RSRGGFGGGG RREGGGYGGG RSGGAERKSY GSGRREGGER SSGGGFRDFS
GRSREDRGAG GAGRREGGSD RRRRS
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