Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0657 |
Symbol | |
ID | 8251745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 764852 |
End bp | 766189 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934306 |
Product | beta-galactosidase |
Protein accession | YP_003090941 |
Protein GI | 255530569 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.647462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGG CCTCAGATTT TGGAAATGAT TTTTTATGGG GTGTGGCCAC GGCTGCGGCA CAGATTGAAG GTGCTGCCGA AGGGTATGGT AAAGGTTTGT CTATATGGGA TACCTTTTCC AAACGATCCG GGAAAATCAA AAAAGGACAT CTGCCAACTC ATACCTGCGA TTTTTATCAC AGTTATAAAG CAGATATTGC CCTTGTAAAA ATGCTGGGTT TCGGTATTTT TCGTTTCTCT ATTTCCTGGC CTCGCATCCT GCCCAACGGC AAAGGGCGCA TCAATCCGGA AGGGATTCTG TTTTATCATC AGGTTATAGA TGAATGCTTG CTGCAGGGTA TTGTACCTTA CATTACTTTA TACCATTGGG ACCTGCCCGA TGCACTGGAA GATGAGGGTG GATGGACGGC TTTTTCTGTC AACAACAGCT TTAACCACTT TGTTACCGTA TGTGCAAAAG CATATGGTGA TAAAGTGAAA AACTGGATCG TATTGAACGA GCCTTTTGGC TTTACTTCAC TGGGTTATAT GCTTGGTGTA CACGCTCCAG GCAAAACAGG ACTCACTAAT TTTTTCTCTG CCGTTCATCA TACGGCAATT GCACAGGCCG ACGGAGGCCG GATATTAAGA GCTGAAGTTC AAAATGCACA TATTGGTACC AGCTTTTCCT GCTCCGAAAT TATTCCCTAT ACACAAAGTG ATTCCGACCT GCTGGCCTCA AAACGGGTTG ATTGCCTCAT GAACCGTTTG TTTATAGAGC CAGCATTGGG TATGGGTTAT CCGACGGCCG ACTGGGAGCT GATGGAAAAG TTTTCTATCC AGCATTCTAC CTGGAGGCAT ACTGAACGCC TGGCCTTCGA TTTTGATTTT ATAGGCCTGC AGAACTATTT TCCACTAACC ATCAAATACA ATGCTTTTAT TCCTGTGGTA CAGGCCTGGG AAGTAAAGGC CAAAAGCCGT AAAAAGCCGC ATACTGCCAT GGGCTGGGAA ATTAATGCCG GCAGTTTTTA CAACATTATC AAACAGTTTA GCGCCTATCC CAATATCAAA AGTTTAATGA TTACCGAAAA TGGGGCGGCC TATCACGATA AACTGATCCA TAACCAGGTG CATGACCAGG ACCGGATTGA TTATTTTCAG CAATACCTGG GCGCGCTGTT AAAGGCAAAG CAGGAGGGGC TCAACATTAC CGGCTATATG GCCTGGACAC TGATGGACAA TTTTGAATGG GCAGAAGGTT TTAATGCCCG CTTTGGCCTG GTGCATACCG ATTTTAAGAC CCAACAGCGT ACTGTTAAAG ATTCCGGACT TTGGTTTAGG GACTTCCTTC GCCGTTAA
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Protein sequence | MIRASDFGND FLWGVATAAA QIEGAAEGYG KGLSIWDTFS KRSGKIKKGH LPTHTCDFYH SYKADIALVK MLGFGIFRFS ISWPRILPNG KGRINPEGIL FYHQVIDECL LQGIVPYITL YHWDLPDALE DEGGWTAFSV NNSFNHFVTV CAKAYGDKVK NWIVLNEPFG FTSLGYMLGV HAPGKTGLTN FFSAVHHTAI AQADGGRILR AEVQNAHIGT SFSCSEIIPY TQSDSDLLAS KRVDCLMNRL FIEPALGMGY PTADWELMEK FSIQHSTWRH TERLAFDFDF IGLQNYFPLT IKYNAFIPVV QAWEVKAKSR KKPHTAMGWE INAGSFYNII KQFSAYPNIK SLMITENGAA YHDKLIHNQV HDQDRIDYFQ QYLGALLKAK QEGLNITGYM AWTLMDNFEW AEGFNARFGL VHTDFKTQQR TVKDSGLWFR DFLRR
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