Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0655 |
Symbol | |
ID | 8251743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 762423 |
End bp | 762896 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934304 |
Product | protein of unknown function DUF163 |
Protein accession | YP_003090939 |
Protein GI | 255530567 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATTA CGTTACTGGT TGTAGGGAAG ACAGAGGATA AATACCTGGT TGAGGGGATT GAAAAATACC TGAGCAGGCT GAAACACTAT ATTGGTTTTA ACCTGGTAGT GATCCCTGAA CTGAAGAATA CAAAGAACCT GACAGAGGCC CAGCAAAAAT CAAAGGAAGC AGAGCTGATC TTAAAGCAGG TCAGTAATCT GGATTCGGTA ATTTTGCTGG ATGAAAAAGG AAAGAAGTAT ACTTCCGTTT CTTTTTCAAA TTATTTAAAC AAACAGATGA TTGGAAGTGT TCAGCATTTG GTTTTTATGA TTGGGGGGCC TTATGGTTTT GACGAAAGTA TTTACAGGCG GGCCAACGGC AGCATGTCGC TGTCAGACAT GACTTTCTCG CATCAGATGG TGCGCTTGTT TTTTGTAGAG CAGCTTTACA GGGCATTTAG CATATTGAAA GGTGAGCCCT ATCACCACGA ATAA
|
Protein sequence | MKITLLVVGK TEDKYLVEGI EKYLSRLKHY IGFNLVVIPE LKNTKNLTEA QQKSKEAELI LKQVSNLDSV ILLDEKGKKY TSVSFSNYLN KQMIGSVQHL VFMIGGPYGF DESIYRRANG SMSLSDMTFS HQMVRLFFVE QLYRAFSILK GEPYHHE
|
| |