Gene Phep_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0626 
Symbol 
ID8251714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp734231 
End bp734608 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content40% 
IMG OID644934275 
Productribosomal protein S13 
Protein accessionYP_003090910 
Protein GI255530538 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGA TATCAGGTAT AGATTTACCA AGAAACAAAA GAGGTGAGAT CGGGTTAACC 
TACATCTTCG GAGTAGGAAG AGCAACTGCG CAACGTATAT TAACGGAGGC AGGTATCGAT
TTTAACAAAA AAGTACAAGA TTGGTCTGAT GATGAGTTAT CGGCAATTCG TACCATTATT
AACGACGGAG TAAAAGTTGA AGGTGCTTTA CGTTCAGAAG TTCAGTTGAA CATTAAGCGT
TTAATGGATA TCGGTTGTTA CCGTGGTTTA CGTCACAGAA AAGGTTTGCC GGTACGTGGT
CAGCGCACTA AGAACAACTC TCGTACACGT AAAGGCAAGA GAAAAACAGT TGCAAACAAG
AAAAAAGCTA CTAAATAA
 
Protein sequence
MARISGIDLP RNKRGEIGLT YIFGVGRATA QRILTEAGID FNKKVQDWSD DELSAIRTII 
NDGVKVEGAL RSEVQLNIKR LMDIGCYRGL RHRKGLPVRG QRTKNNSRTR KGKRKTVANK
KKATK