Gene Phep_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0618 
Symbol 
ID8251706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp729943 
End bp730296 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content37% 
IMG OID644934267 
Productribosomal protein L18 
Protein accessionYP_003090902 
Protein GI255530530 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.969603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGA AAAAATTATC TCGTAGAGAT CGTATAAAAA AAGGCATCAG AAAAAGATTA 
ACAGGTTCTG AAAGCCGTCC ACGTTTATCG GTTTATAGAA GCAATAAAGG GATTTATGCT
CAAATTATTA ACGATGTAAC CGGTAGCACA ATTGTATCAG CTTCATCTTT ATCTAAAGAT
TTTTCAGGTA CAGGCAATAA ATCTGAGCAA TCAGTTGCCG TAGGTAAATT AGTAGCTGAA
AAAGCTATCG CAGCAGGTAT TAAACAAGTT GTTTTCGATA GAAATGGCTA TTTATACCAT
GGTCGCGTTA AATCGCTGGC AGATGGTGCC CGCGAAGCTG GTTTAGAATT TTAA
 
Protein sequence
MAGKKLSRRD RIKKGIRKRL TGSESRPRLS VYRSNKGIYA QIINDVTGST IVSASSLSKD 
FSGTGNKSEQ SVAVGKLVAE KAIAAGIKQV VFDRNGYLYH GRVKSLADGA REAGLEF