| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0595 |
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| Symbol | rpsL |
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| ID | 8251683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 716837 |
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| End bp | 717250 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934244 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_003090879 |
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| Protein GI | 255530507 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.121004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAACCA TTCAACAATT AGTTAGAAAA GGTAGAGTAG CACTGGAGTT CAAGAGTAAG
TCTCCGGCGT TGGACAGCTG TCCACAGCGA AGAGGTGTAT GTACACGTGT ATATACCACT
ACCCCTAAAA AACCAAACTC AGCAATGCGT AAAGTTGCAC GTGTACGTTT AACCAATGGT
AAAGAGGTTA ACGCTTACAT CCCTGGAGAA GGTCACAACT TACAGGAGCA CTCGATCGTA
TTGATTCGTG GTGGTCGTGT TAAAGATTTA CCAGGTGTAC GTTATCACAT CATCCGTGGA
GCATTAGATA CTTCAGGTGT TGCGGGTCGT AACCAACGTC GTTCAAAATA TGGTACTAAA
CGCCCTAAAC CAGGACAAGT AGCTGCGGCT CCTGCAAAAG GTAAAAAGAA ATAA
|
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| Protein sequence | MPTIQQLVRK GRVALEFKSK SPALDSCPQR RGVCTRVYTT TPKKPNSAMR KVARVRLTNG
KEVNAYIPGE GHNLQEHSIV LIRGGRVKDL PGVRYHIIRG ALDTSGVAGR NQRRSKYGTK
RPKPGQVAAA PAKGKKK
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