Gene Phep_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0576 
Symbol 
ID8251663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp693230 
End bp694132 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content44% 
IMG OID644934224 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003090860 
Protein GI255530488 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TAATCTGTGT AACCAGCCTG GCGCTGTTAA GCCTGTCGGG ATGTAAAACC 
ATGCAAAACA CCAAGTCAAT CACCAAAGCT GAATTCCCGG CTTTCAGCAC CGAAGCCCAT
AGGGGGGGCA GGGGGCTAAT GCCCGAAAAT ACCATTGTAG CGATGCGCAA TGCCATCGAT
ATTGGGGTAA CTACCCTCGA AATGGATACC CATATCACCA AAGATGGCCA GGTGGTGGTT
ACACACGACG ATTACCTGAG CCCGTCCTTT ATGCTTACAC CCGAGGGTAA GGAAATCCCT
AAGGCCGATG CTAAAAAATA CCCTATCTAT CAGATGGACT ACAATTTGCT GAAACAGTTT
GATCTGGGCA GCAAATTTCT GGCAGCTTTT CCTGAACAGA AAAAGATAAA AACGAATATA
CCTTTGCTGG CCGATCTGAT TGATGAGGTA CAAACTTACT CTAAAGGAAA AAGGCAGCTA
TTCTACAACA TAGAAACCAA ATGTAGCGCA AAAGGTGATG GCATTGTAAA CCCCGGGCCA
GAGCAATTTG TAAAACTGCT GATGGATGTG ATACAGAAAA AAGGTATTAC CCCTTATGTA
GTGATCCAGT CGTTCGACAA AAGGACCCTG CAGATCCTGC ATAAAAAATA TCCCGAAGTA
AGAACATCCT TTCTGGTAGA CAACAAAAAT ACAGTAGCCG AAAACCTGGC CGACCTTGGT
TTTAATCCAT TCATTTTGAG CCCGGCCTTT AAAATGGTAA ATGAGGAACT GGTTAAGCAA
TGTCACGACC GGAATGTTAA AGTTATTCCC TGGACACCCA ATACCAAAGC GGATATCGAC
AATTTAAAGC AGCTAAAGGT AGATGGCATC ATTTCCGATT ACCCTAACCT GCTGGTCAAT
TAG
 
Protein sequence
MKNIICVTSL ALLSLSGCKT MQNTKSITKA EFPAFSTEAH RGGRGLMPEN TIVAMRNAID 
IGVTTLEMDT HITKDGQVVV THDDYLSPSF MLTPEGKEIP KADAKKYPIY QMDYNLLKQF
DLGSKFLAAF PEQKKIKTNI PLLADLIDEV QTYSKGKRQL FYNIETKCSA KGDGIVNPGP
EQFVKLLMDV IQKKGITPYV VIQSFDKRTL QILHKKYPEV RTSFLVDNKN TVAENLADLG
FNPFILSPAF KMVNEELVKQ CHDRNVKVIP WTPNTKADID NLKQLKVDGI ISDYPNLLVN