Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0569 |
Symbol | |
ID | 8251656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 681684 |
End bp | 683294 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934217 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003090853 |
Protein GI | 255530481 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTTTA GTCGCGAATC ATTCATAAAG CAGGTAGAAG AACGGAACAG TTGGGATGTG ATAGTTGTTG GCGGTGGTGC TACAGGGTTA GGAACCGCTG TGGATGCGGC AAGCAGGGGT TACAGTACTT TGTTGCTGGA ACAGTCGGAT TTTGCAAAAG GAACCTCCAG CCGTAGTACA AAATTGGTGC ATGGCGGGGT AAGATATTTG GCTCAGGGAG ATGTTGCGCT GGTTTATGAG GCATTGCACG AACGTGGTTT GCTGTTAAAA AATGCACCTC ACCTGGTTAA AGACCAGGAG TTTATCATTC CTGTTTATTC CTGGTTGTCT AAATATAAAT ACCTGATCGG CTTAAAACTT TACGACTTGC TGGCGGGGAA AAGCGGTTTT AAAAAATCTT CCTTTTTATC AGCGGATAAA GTATTAAAAG CAATACCTGG ATTAAAACCT GATGGCTTGA TTGGTGGGGT GAGTTATAGC GACGGACAAT TTGATGATGC CCGCTTGGCT TTAAATCTGG CGCAGACGGC TGCCGAATAT GGCGGGGTGT TACTGAACTA TGCGAAGGTT ACCGGGTTAA CGAAAGAAAA CGAAAACATT AGCGGACTAA GTTTTGTAGA TACCGAGACC AATAAAAGCT ATACCCTGAA AGCGAAAGTA GTGGTCAATG CTACCGGAGT ATTTGTAGAT GAGATCCTGA AAATGGATGT TCCCTCAGGA AGAGCAATCG TCCGTCCAAG CCAGGGTGCC CATGTTGTTT TAGATCCTTC ATTTTTGAAA GGGGACAGCG CCCTGATGAT TCCAAAAACA CCGGATGGAA GGGTCTTGTT TGCTGTGCCA TGGCACGGAA AAGTATTGGT AGGAACAACA GATACCCCAT TAAATGAGCA TAGCCTGGAG CCAAGGCCCT TGGATGAAGA GATAGAGTTT ATATTGACAA CGGCAGGCAA ATACCTGACA AAAGAACCTT CAAGAAAGGA TGTATTGGCT GCATTTGCAG GTTTAAGGCC ATTAGCTGCC CCGGGTAAGG ATACCGATAG TACGAAGGAA ATCTCCAGAA GCCATAAGCT CATCATCAGC AAATCAGGAA TGATTACGAT TACCGGGGGC AAATGGACCA CTTATCGTAA AATGGCTATG GATGTAGTAG ATAAAGCTAT TGAATTGGGC AAGCTACAGG CAAAAAAATG TATTACCCAG AATGTTAAAA TCCATGGTTA TGTTGCTAAA ATGCAAACCG GAGATCTGGG CTTATACGGT GCTGATGCTG CTGGTATACT GGAGCTGATA AGCCTACAGC CTGAACTTGG CGCCCGTTTG CATCCTGATT ACAAATATCT GCAAGCTGAA GTGATCTGGA TGGTTAGAAA TGAAATGTCA CGTACGATTG AAGATGTGCT TTCGCGAAGG ATGCGTCTGT TATTCCTGGA TGCGAAAGGG GCTTTAATAC TTGCTCCGGC TGTTGCACAG GTAATGGCTG CCGAATTGCA AAAAAATGAG GCCTGGGTGA AAGAACAGAT TGAAGCCTTT ACTGTGCTGG TAAAACAATA TTTGTTGTAC GCACCCGGAA AGGAAACTGA TAATGTTCAT CAGGTGAAAG TTACGGCCTA A
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Protein sequence | MVFSRESFIK QVEERNSWDV IVVGGGATGL GTAVDAASRG YSTLLLEQSD FAKGTSSRST KLVHGGVRYL AQGDVALVYE ALHERGLLLK NAPHLVKDQE FIIPVYSWLS KYKYLIGLKL YDLLAGKSGF KKSSFLSADK VLKAIPGLKP DGLIGGVSYS DGQFDDARLA LNLAQTAAEY GGVLLNYAKV TGLTKENENI SGLSFVDTET NKSYTLKAKV VVNATGVFVD EILKMDVPSG RAIVRPSQGA HVVLDPSFLK GDSALMIPKT PDGRVLFAVP WHGKVLVGTT DTPLNEHSLE PRPLDEEIEF ILTTAGKYLT KEPSRKDVLA AFAGLRPLAA PGKDTDSTKE ISRSHKLIIS KSGMITITGG KWTTYRKMAM DVVDKAIELG KLQAKKCITQ NVKIHGYVAK MQTGDLGLYG ADAAGILELI SLQPELGARL HPDYKYLQAE VIWMVRNEMS RTIEDVLSRR MRLLFLDAKG ALILAPAVAQ VMAAELQKNE AWVKEQIEAF TVLVKQYLLY APGKETDNVH QVKVTA
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