Gene Phep_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0569 
Symbol 
ID8251656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp681684 
End bp683294 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content45% 
IMG OID644934217 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003090853 
Protein GI255530481 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTTA GTCGCGAATC ATTCATAAAG CAGGTAGAAG AACGGAACAG TTGGGATGTG 
ATAGTTGTTG GCGGTGGTGC TACAGGGTTA GGAACCGCTG TGGATGCGGC AAGCAGGGGT
TACAGTACTT TGTTGCTGGA ACAGTCGGAT TTTGCAAAAG GAACCTCCAG CCGTAGTACA
AAATTGGTGC ATGGCGGGGT AAGATATTTG GCTCAGGGAG ATGTTGCGCT GGTTTATGAG
GCATTGCACG AACGTGGTTT GCTGTTAAAA AATGCACCTC ACCTGGTTAA AGACCAGGAG
TTTATCATTC CTGTTTATTC CTGGTTGTCT AAATATAAAT ACCTGATCGG CTTAAAACTT
TACGACTTGC TGGCGGGGAA AAGCGGTTTT AAAAAATCTT CCTTTTTATC AGCGGATAAA
GTATTAAAAG CAATACCTGG ATTAAAACCT GATGGCTTGA TTGGTGGGGT GAGTTATAGC
GACGGACAAT TTGATGATGC CCGCTTGGCT TTAAATCTGG CGCAGACGGC TGCCGAATAT
GGCGGGGTGT TACTGAACTA TGCGAAGGTT ACCGGGTTAA CGAAAGAAAA CGAAAACATT
AGCGGACTAA GTTTTGTAGA TACCGAGACC AATAAAAGCT ATACCCTGAA AGCGAAAGTA
GTGGTCAATG CTACCGGAGT ATTTGTAGAT GAGATCCTGA AAATGGATGT TCCCTCAGGA
AGAGCAATCG TCCGTCCAAG CCAGGGTGCC CATGTTGTTT TAGATCCTTC ATTTTTGAAA
GGGGACAGCG CCCTGATGAT TCCAAAAACA CCGGATGGAA GGGTCTTGTT TGCTGTGCCA
TGGCACGGAA AAGTATTGGT AGGAACAACA GATACCCCAT TAAATGAGCA TAGCCTGGAG
CCAAGGCCCT TGGATGAAGA GATAGAGTTT ATATTGACAA CGGCAGGCAA ATACCTGACA
AAAGAACCTT CAAGAAAGGA TGTATTGGCT GCATTTGCAG GTTTAAGGCC ATTAGCTGCC
CCGGGTAAGG ATACCGATAG TACGAAGGAA ATCTCCAGAA GCCATAAGCT CATCATCAGC
AAATCAGGAA TGATTACGAT TACCGGGGGC AAATGGACCA CTTATCGTAA AATGGCTATG
GATGTAGTAG ATAAAGCTAT TGAATTGGGC AAGCTACAGG CAAAAAAATG TATTACCCAG
AATGTTAAAA TCCATGGTTA TGTTGCTAAA ATGCAAACCG GAGATCTGGG CTTATACGGT
GCTGATGCTG CTGGTATACT GGAGCTGATA AGCCTACAGC CTGAACTTGG CGCCCGTTTG
CATCCTGATT ACAAATATCT GCAAGCTGAA GTGATCTGGA TGGTTAGAAA TGAAATGTCA
CGTACGATTG AAGATGTGCT TTCGCGAAGG ATGCGTCTGT TATTCCTGGA TGCGAAAGGG
GCTTTAATAC TTGCTCCGGC TGTTGCACAG GTAATGGCTG CCGAATTGCA AAAAAATGAG
GCCTGGGTGA AAGAACAGAT TGAAGCCTTT ACTGTGCTGG TAAAACAATA TTTGTTGTAC
GCACCCGGAA AGGAAACTGA TAATGTTCAT CAGGTGAAAG TTACGGCCTA A
 
Protein sequence
MVFSRESFIK QVEERNSWDV IVVGGGATGL GTAVDAASRG YSTLLLEQSD FAKGTSSRST 
KLVHGGVRYL AQGDVALVYE ALHERGLLLK NAPHLVKDQE FIIPVYSWLS KYKYLIGLKL
YDLLAGKSGF KKSSFLSADK VLKAIPGLKP DGLIGGVSYS DGQFDDARLA LNLAQTAAEY
GGVLLNYAKV TGLTKENENI SGLSFVDTET NKSYTLKAKV VVNATGVFVD EILKMDVPSG
RAIVRPSQGA HVVLDPSFLK GDSALMIPKT PDGRVLFAVP WHGKVLVGTT DTPLNEHSLE
PRPLDEEIEF ILTTAGKYLT KEPSRKDVLA AFAGLRPLAA PGKDTDSTKE ISRSHKLIIS
KSGMITITGG KWTTYRKMAM DVVDKAIELG KLQAKKCITQ NVKIHGYVAK MQTGDLGLYG
ADAAGILELI SLQPELGARL HPDYKYLQAE VIWMVRNEMS RTIEDVLSRR MRLLFLDAKG
ALILAPAVAQ VMAAELQKNE AWVKEQIEAF TVLVKQYLLY APGKETDNVH QVKVTA