Gene Phep_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0550 
Symbol 
ID8251637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp656382 
End bp656963 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content38% 
IMG OID644934200 
Producttransferase hexapeptide repeat containing protein 
Protein accessionYP_003090836 
Protein GI255530464 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.259438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0248751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAA AAAAATATTA TTGTCATCCT ACAGCAATTG TAGATGAGGG TGCCATTATT 
GGTGATGATG TGAAGATCTG GCATTTCTCT CATATTATGC GGGATGCAAA AATTGGTAGT
CGTTGTAATA TCGGGCAGAA TGTAATGATT GCAAGCCAGG TAGTTTTAGG TCAGAATGTA
AAGGTTCAAA ATAATGTATC TATTTATGAA GGTGTGATAT GTGAAGATGA TGTTTTTCTG
GGGCCTTCTA TGGTTTTTAC CAATGTAATT AATCCTCGTA GCGCCGTTAA CAGAAGAGGT
AAGTATTTAA GAACACATGT TGGAAAAGGA GCAAGTATTG GAGCCAATGC AACAATTGTT
TGCGGCCATG ATATTGGTAG TTATGCGTTA ATTGGAGCGG GGGCTGTGAT TATCAAACCA
GTGTTACCCT ATGCCTTAGT GGTTGGAAAC CCGGCTAAAC AAATAGGTTG GGTAAGTGAA
TACGGTCATC GGTTGATTTT TGATGAAGGA TTTAAAGCCA TTTGTCCGGA AACTCAACAG
CAATATGAAT TGAAAGGTAA TCTTATCATC AAGATCAGCT AA
 
Protein sequence
MSLKKYYCHP TAIVDEGAII GDDVKIWHFS HIMRDAKIGS RCNIGQNVMI ASQVVLGQNV 
KVQNNVSIYE GVICEDDVFL GPSMVFTNVI NPRSAVNRRG KYLRTHVGKG ASIGANATIV
CGHDIGSYAL IGAGAVIIKP VLPYALVVGN PAKQIGWVSE YGHRLIFDEG FKAICPETQQ
QYELKGNLII KIS