| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0525 |
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| Symbol | |
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| ID | 8251612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 635288 |
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| End bp | 636856 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934175 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003090811 |
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| Protein GI | 255530439 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.692758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000137784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAACTCAT CACTGCATGT ATTAGATTAC ATCATTATTA TAGTATTTTT GATAGGAACG
CTCGTGTTCG GACTGGTATT TGCCAGGGGA CAGAAAACGA CAAAAAATTA TTTCCTTGCG
AAAGGCAAGA TCCCTTCCTG GGCAATAGGG ATCTCGCTGC TCGCCACATT GATCAGCAGT
GTAACATTCC TGGCTTACCC GGGTACGGGA TATTCTTCTA ACTGGATCTT ACTGGTTCAG
GGCTTAATGG TACCTGTAGT GCTGCTTGGC GTAATCTGGT TTATTGTTCC CTTATACCGG
AAAGTGATCA ATTTGAGTAC TTACGAATAT TTTGAGCAGA GATTTGGTTC TTTTGCCCGA
TATTACAGTT CACTGGCCTT TGTGCTGAGG CAGTTTTCTG GTATGGGCAC AGTTTTTTTT
CTGCTTGCGG TGGCCTTAGG TAGTATGATC CATGTCAATA CCGCTATAAT TATTCTGGTT
GTGGGGGCTA TAATTATCAT TGTCAATTTA CTGGGAGGAA TTGAGGCAGT AATCTGGCTG
GATGTATTTC AGGGCTTTAT GCTTTTTGCC AGCGGGATCA TTTGCATCAG TATATTGCTC
TTTTCTGTAG ACGGAGGTCC GGCTGAAGTC TGGAAAATTG CTTCTGCTAA CGGCAGAACA
GGTTTTGGAC CTTATGAATG GGACCTTACC AAATTGACTT TTCTGGTGAT GGCTATAAAC
GGGGCTTTTT ATGCGGTACA GAAGTACGCA ACAGATCAGA CGGTGGTGCA GCGTTACCTG
ACTGCAAAAA CTGACCGGTC GGCCATCCGC GCATCACTGC TGGGTATCTT GTTAACCGTT
CCGGTATGGA TCTTGTTTAT GTTTATAGGA ACTGCATTGT TTGTGTTTTA TAAGCAAAAC
CCAATTCCGG CAGATATAAG ACCTGATGCT GTTTTCCCTT ATTTTATTAT GACCAAACTG
CCAACAGGTG TCATAGGGTT AATTCTTTCC GCAATGATTT CTGCAGCCAT CTGTAGTTTA
AGCGCCGATC TGAATTCTCT TGCTGCAGTG GGGGTAGAAG ACTATTATAA GAAATTAAGG
CCCGGCAAAA CAGATAAGGC TTATTTAAAG GCATCGAAAT ATATTGTTGC CTTATCTGGG
CTGATCTCTA TAGGAATAGC CATGTTGTAT CTGAATGCCG GAAATGAAGG GGTGCTGGGG
ATCGTATTTA CGCTGTACGC CATATTTTCA GGCGGCATTG TAGGTATGTT TTTACTGGGT
TTATTTAGTG CCAGGGCCAA TAATCAAGGA ATTACCATTG CCATTGTAGT CTGCATTCTT
TTTACGGCAT ATGCATTTTT AACTTCTACA GAAATCGGAA TTGGGGCAAA TAAATCGCTG
TTGTTAGATT TTGGTAAGTA TAACTTTACA CACCATAAGC TGATGCTGGG TGTATACAGC
CATCTCATCG TTATTGTTGT GGGTTATGTG GCCAGCTTAT TTTTTCCAAA ACCGGTTCTG
GATACCAATT TGCTTTATAG TGGCTGGCTG GCGGTTAGAC GGGAAGAAAG GGCAAGGGCA
GACAAATAG
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| Protein sequence | MNSSLHVLDY IIIIVFLIGT LVFGLVFARG QKTTKNYFLA KGKIPSWAIG ISLLATLISS
VTFLAYPGTG YSSNWILLVQ GLMVPVVLLG VIWFIVPLYR KVINLSTYEY FEQRFGSFAR
YYSSLAFVLR QFSGMGTVFF LLAVALGSMI HVNTAIIILV VGAIIIIVNL LGGIEAVIWL
DVFQGFMLFA SGIICISILL FSVDGGPAEV WKIASANGRT GFGPYEWDLT KLTFLVMAIN
GAFYAVQKYA TDQTVVQRYL TAKTDRSAIR ASLLGILLTV PVWILFMFIG TALFVFYKQN
PIPADIRPDA VFPYFIMTKL PTGVIGLILS AMISAAICSL SADLNSLAAV GVEDYYKKLR
PGKTDKAYLK ASKYIVALSG LISIGIAMLY LNAGNEGVLG IVFTLYAIFS GGIVGMFLLG
LFSARANNQG ITIAIVVCIL FTAYAFLTST EIGIGANKSL LLDFGKYNFT HHKLMLGVYS
HLIVIVVGYV ASLFFPKPVL DTNLLYSGWL AVRREERARA DK
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