Gene Phep_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0508 
Symbol 
ID8251595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp614368 
End bp615420 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content43% 
IMG OID644934158 
Productferredoxin 
Protein accessionYP_003090794 
Protein GI255530422 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.303507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTGA TACAACTGCG CATTACTGAA ATGACATTTT GTCCAGGTGA AACACTGATT 
ATAAGTTTTG AACCTGTGGA TGGAATAAAA CCCAAATATC TTGCAGGCCA GTTCTTAACA
CTCGTTTTTA AAGTGAATGG CAGAGAATTG AGAAGGTCTT ACTCTTTATG CAGTTCGCCT
GATGTAGACG AGCCGCTTTC TATTGCCATA AAACGGGTTG AAAATGGCGA AATATCCAGG
TTGCTGCACC ATAAAACGGC CGTAGGGGAT GTGCTTACTG CAGTTGAACC CAATGGCCGT
TTTAGCTATG TACCTGAAGT GCAATTGAAA AGAACAGTTT TTCTTTTTGC TGCGGGTGTA
GGCATAACCC CATTGTACGC CATTGTTAAA ACTGCACTCA TTGCTGAACA GCATACAAAT
ATCATTCTGA TCTATAGCAG CCGCTCGGCC GATCAAACCC TGTTTTATAA AGAATTAAAC
AGTTGGCAGG TGCAATATCC AGGACGTTTC AAGATTGTTT ATGTGTTTAG CCAGTCGCAA
AACCTCCTGA TGGCCCGTTT AAATGGACCA CTAATAGAAA GGCTGGTGGC TGAGCATCTG
GAGTTCAATA AGGAAGATGC TTTGTTGTAT ACCTGTGGTC CGGTCGACTA CATGGACGTA
TGTCGTATTA CACTGCTCAA TTTAGGATTT GACCAGGACC AGATCAGGAG GGAGACCTTT
GTGCTCCCCG AAGATGAGCA GGACGAAGAT GATGCCACCG AGAAAAAGGT AAGACATACC
AATACCTATT CGGTAGTTTT GAATTTTAAG AACAATATAT ATCATTTAAG CGTTCCTTAT
AACCAAACCA TACTGGATGC AGCATTGGAG AAAAACATTA AACTACCCTA TAGCTGCCAT
GCGGGAATAT GCAGCACCTG TACCGCAAAT TGCATTAAGG GTGGTGTAGA GATGGATTAT
AATGAAGTAC TGATGGACGA TGAAATTGCA GCTGGAAGGG TGTTGGTTTG TACCGGCCAT
CCTACGGAAG ACGGTACCAC AATTGTTTGG TAA
 
Protein sequence
MVLIQLRITE MTFCPGETLI ISFEPVDGIK PKYLAGQFLT LVFKVNGREL RRSYSLCSSP 
DVDEPLSIAI KRVENGEISR LLHHKTAVGD VLTAVEPNGR FSYVPEVQLK RTVFLFAAGV
GITPLYAIVK TALIAEQHTN IILIYSSRSA DQTLFYKELN SWQVQYPGRF KIVYVFSQSQ
NLLMARLNGP LIERLVAEHL EFNKEDALLY TCGPVDYMDV CRITLLNLGF DQDQIRRETF
VLPEDEQDED DATEKKVRHT NTYSVVLNFK NNIYHLSVPY NQTILDAALE KNIKLPYSCH
AGICSTCTAN CIKGGVEMDY NEVLMDDEIA AGRVLVCTGH PTEDGTTIVW