Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0494 |
Symbol | |
ID | 8251581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 590205 |
End bp | 591602 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934144 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_003090780 |
Protein GI | 255530408 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCC TTCAAAACCT TGAATCATAC ATCCGCAAGC ATGCGCTTTT CCAGCCAGGC GATAAAATTC TGCTGGCCGT TAGTGGTGGC AAAGATTCCG TTTTGATGGC GCATTTATTT AAACTCTCCG GATTTAATTT TGGTATAGCA CATTGCAATT TTAATTTGAG GGGAGCTGAG TCGCAAAGGG ACGAAGCTTT TGTGAAAATG CTGGCTGCCA GTATGGATGT CCCTTTTCAC CTGGTCCATT TTCATACCAA AGCTTATGCA GCCCGGCATA AAGTTTCTAC GCAAATGGCG GCCAGGACCC TGCGTTACCA ATGGTTTGAA GAGGTCAGGT TAGCACAGGG TTACAAGGCA ATTGCCCTGG CACAGCACCA GAACGACGCG ATTGAAACCG TATTGCTCAA TCTGGTACGG GGTACGGGAA TTGCCGGTAT GCATGGCATA CTCCCTAAAA GAGGCTGGCT GATCCGGCCA TTGCTTTTTC TTTCCGGCGG GGATATCGCT GCACTGGTTA AATCATTTGA GCTCGACTAT GTAGAAGACA GTTCCAATAA AAGTACGGAT TACGTCAGGA ACAAACTCCG GTTAAAGGTC ATCCCTTATC TTAAAGAGAT GAACCCCAAC CTGGAACTTA CTTTTGAAAA CAACATGCAG CGCTTTGCAG AAACAGAATT GGTTTTACAA ACTACGGTAG CTGCACTAAA GAAAAAGCTG TTTGCAGAAA AGGAAGGGAA ATATTATCTG GCAATGACCA AGGTAAAGGA ACTGAAGCCC CAGCGTTTAT TGCTCTTTGA GCTGCTCAGG CCGTTTAACT TTACAGAATC GGTTGTTGAT GAGCTTATAG CTTCGCTAAA CAAACAAAGC GGCACTTCAT TTTACAGTAA TTCGCACCGC ATTGTTGTAG ACCGGGCCAG TCTCATCCTC AGCTCAAGGT CAGGCGGGCA GCCAGGGTTA TCCCATCAGT TAATTCATCC CCAGGATGAG CTAGTGGACC TGAAGGCCGG TCGGCTGCTG ATTTCCAGAT CAACCCATAC TGGCTTTGAA CCAAACCCTG ACAAAGCTTA TGTTGATGGG GATAAGCTCC TTTATCCGCT GGTGCTGCGA AGCAGGGAGC CGGGCGACAG GTTTAAACCA ATGGGTATGA AAAGCTTTAA AAAACTGAGC GATTTTTTTA TAGACGAGAA AGTGCCACTT AGCCACAAAG ATGAAGTCCC TATACTGGTT AATGGCAATG GAGAGGTGAT CTGGGTGGCA GGCCTAAGGC AGGACAACAG ATACCGGCTT ACAGAAGGCA CAAAAAATGT AACAATCTTT GAGCTGAAAC ATCTACTTAT TACAATTCCT AAACAAAATA AAACTGTTGC AGACAAGGAT GGAACTAAAA AACCTTAA
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Protein sequence | MILLQNLESY IRKHALFQPG DKILLAVSGG KDSVLMAHLF KLSGFNFGIA HCNFNLRGAE SQRDEAFVKM LAASMDVPFH LVHFHTKAYA ARHKVSTQMA ARTLRYQWFE EVRLAQGYKA IALAQHQNDA IETVLLNLVR GTGIAGMHGI LPKRGWLIRP LLFLSGGDIA ALVKSFELDY VEDSSNKSTD YVRNKLRLKV IPYLKEMNPN LELTFENNMQ RFAETELVLQ TTVAALKKKL FAEKEGKYYL AMTKVKELKP QRLLLFELLR PFNFTESVVD ELIASLNKQS GTSFYSNSHR IVVDRASLIL SSRSGGQPGL SHQLIHPQDE LVDLKAGRLL ISRSTHTGFE PNPDKAYVDG DKLLYPLVLR SREPGDRFKP MGMKSFKKLS DFFIDEKVPL SHKDEVPILV NGNGEVIWVA GLRQDNRYRL TEGTKNVTIF ELKHLLITIP KQNKTVADKD GTKKP
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