Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0478 |
Symbol | |
ID | 8251565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 570270 |
End bp | 572105 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644934128 |
Product | ABC transporter related |
Protein accession | YP_003090764 |
Protein GI | 255530392 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0961856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAAAGC AGCTGAATGA AATAGATGCA GAATCGCTGA CTTTTAAAGC CAGGGTAGCT GCACTGGGCA ACCTGCCTGA ATTTTTTAAG CTGGTATGGC AAACCAGCAG ATGGATGACC ATTTGCAATT TTTTGCTGCG CATTGCCCGT TCAATGATGC CACTGGCCAT TTTATGGGTG GGTAAGCATA TTATTGATGA AGTGGTGCTG CTGGGCACCG GCAGGGCTGG GGTTTCCCAG GAATTTCTCT GGAAACTGGT AGGGTTGGAG TTTGGTCTGG CCATTTTAAC AGATATTTTA AACAGGTCTA TTAACCTGAT GGATGGCCTG CTGGGCGACC AGTTTGCCAA TTACACCTCA GTCAGGATCA TGAAACACGC AGCAACGCTA GACCTGGACC AGTTTGAAGA TTCCGTTTTT TACGATAAGA TGGAACGTGC CAGGCAGCAG ACAGTAGGAC GTACCGTGCT CCTGTCGCAG GTGATGGGAC AAATCCAGGA CCTGATCACG ATGGGTTTTC TGGCAGTAGG CCTGGTGGCC TTTAATCCCT GGCTGATCCT GTTGCTACTG GCTACCATTT TGCCTGCATT TATTGGGGAA TCTTATTTTA ACGACAGAAG TTACGCCCTC TCGCGCAGAC GTACACCTGA ACGCAGGGAG CTGGATTATG TGCGTTACCT GGGCGCAAGC GATGACACGG CAAAAGAAAT TAAGGTATTT AACCTTTCAG GATTTATCAT AGACCGTTTT AAAACACTGT CAGAGAAATT TTATACAGAG AACAGACAAT TGTCGCAACG CCGGGCAACC TGGGGAACAT TTTTTTCTTT TCTGGGTAGC ACGGGCTATT ACCTGGCCTA TGTTTATATC ATTTATAAAA CCATTAACGG GGCAGTTACC ATTGGTGAAC TTACGTTTTT AGCTGGTTCT TTCCGGCAAA TGCGGGGTTT AATGGAAGGG GTGCTGCTGC GTTTCACGGC CGTTTCACAG GGTGCCATTT ACCTGAGCGA TTTCTTTGAA TTTTTCGAGA TTGAGCCCAA GATCAGGAAA TTGTTAAATG CAAAGCCATT TCCAAATCCG ATCAGGCTGG GTTTTGTTTT TGAAAACGTA GGCTTTCAGT ATGCCCATTC ATCCCGCTGG GCAAACCGGC ATTTGAGTTT TACCCTTCAT CCCGGAGAAA AGCTGGCCCT GGTAGGTGAA AACGGTTCGG GTAAAACAAC ACTCGTTAAA TTGCTGGCCC GGCTTTACGA TCCCACCGAA GGTCGGATAT TGCTGGACGG GGTAGACCTG AAAGCATACG ACCTGGATGA ACTGCGCTTA AATGTGGGCA TCATTTTTCA GGATTACCTG CGTTATCAGA TGACCCTTGC ACAGAACATT GCTGCCGGGA ACATTATAGA GCAAGATAAC AGGGCATTGA TTGAATCGGC AGCGAAACAA AGCCTTGCGG ATACCTTGAT TGAAAAGCTA CCTGCAGGTT ATGATCAGAT GCTGGGCAAG CGTTTTGCAA ATGGGGTAGA CTTATCGGGG GGCGAATGGC AAAAGGTGGC GCTGGCCAGG GCTTATATGA AAGACGCACA GCTGCTGATC CTTGATGAAC CTACCGCCGC CCTTGATGCC AGGGCAGAGT ATGAAGTTTT TGAACGTTTT GCCGAATTGA CAAAAGGGAA ATCAGCAGTG CTGATCTCCC ATCGTTTTTC TACAGTAAGG ATGGCCGACC GGATCCTGGT ACTTGATAAA GGGCAGCTGA TCGAGATCGG TAGCCATGAA GAGCTGATCC TTAAAAAAGG CCGCTATGCA GAGCTGTTTG AACTGCAGGC CAAAGGCTAC AGGTAA
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Protein sequence | MAKQLNEIDA ESLTFKARVA ALGNLPEFFK LVWQTSRWMT ICNFLLRIAR SMMPLAILWV GKHIIDEVVL LGTGRAGVSQ EFLWKLVGLE FGLAILTDIL NRSINLMDGL LGDQFANYTS VRIMKHAATL DLDQFEDSVF YDKMERARQQ TVGRTVLLSQ VMGQIQDLIT MGFLAVGLVA FNPWLILLLL ATILPAFIGE SYFNDRSYAL SRRRTPERRE LDYVRYLGAS DDTAKEIKVF NLSGFIIDRF KTLSEKFYTE NRQLSQRRAT WGTFFSFLGS TGYYLAYVYI IYKTINGAVT IGELTFLAGS FRQMRGLMEG VLLRFTAVSQ GAIYLSDFFE FFEIEPKIRK LLNAKPFPNP IRLGFVFENV GFQYAHSSRW ANRHLSFTLH PGEKLALVGE NGSGKTTLVK LLARLYDPTE GRILLDGVDL KAYDLDELRL NVGIIFQDYL RYQMTLAQNI AAGNIIEQDN RALIESAAKQ SLADTLIEKL PAGYDQMLGK RFANGVDLSG GEWQKVALAR AYMKDAQLLI LDEPTAALDA RAEYEVFERF AELTKGKSAV LISHRFSTVR MADRILVLDK GQLIEIGSHE ELILKKGRYA ELFELQAKGY R
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