Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0476 |
Symbol | |
ID | 8251563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 568455 |
End bp | 569081 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934126 |
Product | peptide methionine sulfoxide reductase |
Protein accession | YP_003090762 |
Protein GI | 255530390 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.825403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCTCC TTTATAATGA TACGATCATG AAGTATTTAT CAATTATGAT TATAGTTCTC TTATCCTTAA ACCGTGCCGA AGCACAATCC GGGAAATTAC AAAAGGCAAC ATTTGGTATG GGCTGCTTCT GGTGTTCAGA GGCCTTATTT CAAAGGCTTA ACGGCGTGGT TAGCGTACGC TCCGGATACG AAGGCGGCCA GGTACCCAAT CCGTCTTACG AGGATGTATG CAGCGGAACA ACCGGCCATG CCGAGGTGAT AGAGCTTACT TACGATCCGC TTAAAATCAA ATATGATGAA CTGCTTGAGG TTTTCTGGAA AAGTCATGAC CCGACCACTT TAAACCGCCA GGGTGCCGAT ATCGGTACAC AATATCGGTC TGTAGTATTT TATCACAACG ATGAGCAGAA ACAAACTGCC GAAAAGTATA AAAAAGAACT CAATGCCTCC AATGCTTATG GTAAACCCGT TGTTACCGCG ATAGAAAAAG CAGCTCCATT TTATAAAGCC GAGAACTATC ACCAGGATTA TTTCAATAAG AATGGCAGCC AGCCTTATTG CAGGATGGTG ATTTTGCCAA AACTGGAAAA GCTGGAAAAG GTTTTTAAAG CAAAATTAAA ACACTGA
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Protein sequence | MVLLYNDTIM KYLSIMIIVL LSLNRAEAQS GKLQKATFGM GCFWCSEALF QRLNGVVSVR SGYEGGQVPN PSYEDVCSGT TGHAEVIELT YDPLKIKYDE LLEVFWKSHD PTTLNRQGAD IGTQYRSVVF YHNDEQKQTA EKYKKELNAS NAYGKPVVTA IEKAAPFYKA ENYHQDYFNK NGSQPYCRMV ILPKLEKLEK VFKAKLKH
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