Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0374 |
Symbol | |
ID | 8251459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 442382 |
End bp | 442933 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934022 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003090660 |
Protein GI | 255530288 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA TTATTTTATC AGCAATTGCC ATAGTAGCTC TGGCATTCAC AACACAGGTT TACGCTCAAA AAAATCCGAT GGTAGGTGGT GCTGCAATGT ACGCCACAAA AGACATTGTA GACAATGCAG TAAACTCTAA AGACCATACT ACACTTGTTG CTGCCGTTAA AGCAGCCGGA TTGGTCGAAA CTTTAAAAGG AGCAGGACCA TTTACTGTTT TTGCCCCAAC AAATGCTGCA TTCAACAAAC TGCCTGCCGG AACGGTAGCG ACCCTACTGA AACCTGAAAA CAAATCCGCC TTAACCAAAG TATTAACTTA TCATGTTGTT GCCGGTAAAT GGACTGCGGC AGACATTGAC AAAGCCATCA AAAAAGGAAA AGGCAAAACA GAACTGACTA CTGTTGAAGG CGGTAAACTC TGGGCATGGA TGGAAGGAAA AAAATTAGTA CTTAAGGATG AAAAAGGCGG AACTGCAACG GTTACCATTG CCAACGTAAT GCAAAAAAAT GGAGTGATCC ATGTGATTGA TACCGTATTG ATGCCAAAAT AA
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Protein sequence | MKRIILSAIA IVALAFTTQV YAQKNPMVGG AAMYATKDIV DNAVNSKDHT TLVAAVKAAG LVETLKGAGP FTVFAPTNAA FNKLPAGTVA TLLKPENKSA LTKVLTYHVV AGKWTAADID KAIKKGKGKT ELTTVEGGKL WAWMEGKKLV LKDEKGGTAT VTIANVMQKN GVIHVIDTVL MPK
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