Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0367 |
Symbol | |
ID | 8251452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 434809 |
End bp | 435510 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644934015 |
Product | response regulator receiver |
Protein accession | YP_003090653 |
Protein GI | 255530281 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAATA CTATGTCGAA AGGAGTTAAA ATACTGATAG TTGAGGACGA TGAGAATTTA CGCTTTTTAG TTGTACATCG TTTAAAGGCC GAAGGCTACG AGGTTTCGGA AGTGGGCGAT GGTGAGGCTG CGGAACGCAT GATCCTGGCT GAAAAACCGG ATATTGTATT GCTGGACTGG ATGCTGCCCG GTAAACAGGG TGCAGAGGTG TGTGAAGAAG TAAGGAAACA GGGTTTTGAT AACCTGATCA TTATGATGAC TGCCAAGGCA CAGGATGTGG ACAAGATTGA TGCTTATAAC TTTGGGGTTT CGGATTATGT AACCAAACCT TTTAACATGG ATGTGCTGGT GGCCATGCTG GACAGTAAAG TGAAGTTTAT TTTAAATAAC GACCGTTCTG AAGTACACCG TTTTGGCAAT ATGGAACATC ATCCTAATAT CCATACTTTG TTCAGGGACG GAAAGAAAAT AGAGCTGACC ATTCTGGAGA ACAGGATATT GCTATACTTT TTGCGGAACC CGAATAAGGT GATCAACAGG GATGAACTGA TGCTGGTGGT ATGGGGCTAT AATTCTGATG TAAATACGCG TACGCTGGAT ATGCACATTG TGCGCTTGCG CAAAAAGATA GAACTGAACC CCGACAACCC GCAGCTGTTG CAAACTGTAA GAGGCGTGGG CTACCGTTTT AACCCTTCCT AA
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Protein sequence | MINTMSKGVK ILIVEDDENL RFLVVHRLKA EGYEVSEVGD GEAAERMILA EKPDIVLLDW MLPGKQGAEV CEEVRKQGFD NLIIMMTAKA QDVDKIDAYN FGVSDYVTKP FNMDVLVAML DSKVKFILNN DRSEVHRFGN MEHHPNIHTL FRDGKKIELT ILENRILLYF LRNPNKVINR DELMLVVWGY NSDVNTRTLD MHIVRLRKKI ELNPDNPQLL QTVRGVGYRF NPS
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