Gene Phep_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0367 
Symbol 
ID8251452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp434809 
End bp435510 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content44% 
IMG OID644934015 
Productresponse regulator receiver 
Protein accessionYP_003090653 
Protein GI255530281 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA CTATGTCGAA AGGAGTTAAA ATACTGATAG TTGAGGACGA TGAGAATTTA 
CGCTTTTTAG TTGTACATCG TTTAAAGGCC GAAGGCTACG AGGTTTCGGA AGTGGGCGAT
GGTGAGGCTG CGGAACGCAT GATCCTGGCT GAAAAACCGG ATATTGTATT GCTGGACTGG
ATGCTGCCCG GTAAACAGGG TGCAGAGGTG TGTGAAGAAG TAAGGAAACA GGGTTTTGAT
AACCTGATCA TTATGATGAC TGCCAAGGCA CAGGATGTGG ACAAGATTGA TGCTTATAAC
TTTGGGGTTT CGGATTATGT AACCAAACCT TTTAACATGG ATGTGCTGGT GGCCATGCTG
GACAGTAAAG TGAAGTTTAT TTTAAATAAC GACCGTTCTG AAGTACACCG TTTTGGCAAT
ATGGAACATC ATCCTAATAT CCATACTTTG TTCAGGGACG GAAAGAAAAT AGAGCTGACC
ATTCTGGAGA ACAGGATATT GCTATACTTT TTGCGGAACC CGAATAAGGT GATCAACAGG
GATGAACTGA TGCTGGTGGT ATGGGGCTAT AATTCTGATG TAAATACGCG TACGCTGGAT
ATGCACATTG TGCGCTTGCG CAAAAAGATA GAACTGAACC CCGACAACCC GCAGCTGTTG
CAAACTGTAA GAGGCGTGGG CTACCGTTTT AACCCTTCCT AA
 
Protein sequence
MINTMSKGVK ILIVEDDENL RFLVVHRLKA EGYEVSEVGD GEAAERMILA EKPDIVLLDW 
MLPGKQGAEV CEEVRKQGFD NLIIMMTAKA QDVDKIDAYN FGVSDYVTKP FNMDVLVAML
DSKVKFILNN DRSEVHRFGN MEHHPNIHTL FRDGKKIELT ILENRILLYF LRNPNKVINR
DELMLVVWGY NSDVNTRTLD MHIVRLRKKI ELNPDNPQLL QTVRGVGYRF NPS