Gene Phep_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0360 
Symbol 
ID8251445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp425632 
End bp426822 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content48% 
IMG OID644934008 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_003090646 
Protein GI255530274 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAGA ATACTTATAA AATAGTTGGC GGAAAGATCA TTACGCCTTA TCGCATCATT 
GATCAGGGAA CACTGTTAAT TACAGGAGAT AAAATTGCAC AGATCAGCGA AGGGGATATC
CATGCCCCCG GTGCTATTGA AATTGATGCC CGGGGGAACT ATGTTTCCCC GGGTTTTATA
GACATCCATA TCCATGGGGG TGGCGGTCAT GATTTTATGG ATGGCAACGA AACGGCTTTT
CTTAAAATTG CTGAAACGCA TGCCAGGTTT GGTACAACGG CCATGGTACC TACCACGCTG
ACCAGCACCC GTGAAGAGCT GCTGAATACG CTGGATATTT ATAAAGAGGC AGATAAAAAG
AATACCATGG GTGCAAAATT TATCGGTATG CACCTGGAAG GGCCTTATTT CTCGCCAGAT
CAGCGCGGTG CCCAGGATCC GCGTTTTATC CGTAACCCTG ACCCGAAAGA GTATGAAGCC
ATTATAGCCC ATTCTGATGT CATTAAACGC TGGAGTGCTG CCCCTGAATT ACCAGGGGCC
ATTCCATTTG GCAGGTACCT GAAAAGTAAG GGCATTATTG CTGCAATTGC ACATACCGAT
GCCATTTATG AGGAAACACT GGAAGCCTTT GAAAACGGTT ACACCCTGGC CACCCATCTT
TATTCCTGCA TGTCGGGCGT AACCCGCCGT AATGCTTACC GCTATGCGGG TGTGATAGAA
AGCGCTTACC TGATTGATGA GATGGATGTA GAGATCATTG CAGATGGCAT ACACCTGCCT
GCAGCCCTGC TGCAACTGGT GTATAAAATA AAAGGCACAG TAAAAACGGC ATTGATTACA
GATGCCATGC GGGGTGCCGG GATGCCGCCT GGCGACAGCA TATTGGGCAA CATTGCTACC
GGTATGAAGG TAATTGTGGA AGATGGGGTA GCCAAACTGC CCGACCGCAG TGCTTTTGCC
GGAAGTGTGG CCACTACAGA CAGACTGGTA CGTAACATGG TCCAAATGGC ACACGTACCC
TTAACTGAAG CTATAAAAAT GATCAGCACT ACGCCTGCGC GCATCATGGG TATTCAGGAC
AGCACAGGAT CACTGATTGA GGGCAAACAG GCTGATGTGG TCATTTTTGA TGAGAACATC
GATATCCGGA TGACCATGGT AAATGGCCAT ATAGTGTATA CAAAGCCTTA A
 
Protein sequence
MLQNTYKIVG GKIITPYRII DQGTLLITGD KIAQISEGDI HAPGAIEIDA RGNYVSPGFI 
DIHIHGGGGH DFMDGNETAF LKIAETHARF GTTAMVPTTL TSTREELLNT LDIYKEADKK
NTMGAKFIGM HLEGPYFSPD QRGAQDPRFI RNPDPKEYEA IIAHSDVIKR WSAAPELPGA
IPFGRYLKSK GIIAAIAHTD AIYEETLEAF ENGYTLATHL YSCMSGVTRR NAYRYAGVIE
SAYLIDEMDV EIIADGIHLP AALLQLVYKI KGTVKTALIT DAMRGAGMPP GDSILGNIAT
GMKVIVEDGV AKLPDRSAFA GSVATTDRLV RNMVQMAHVP LTEAIKMIST TPARIMGIQD
STGSLIEGKQ ADVVIFDENI DIRMTMVNGH IVYTKP