Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0301 |
Symbol | |
ID | 8251386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 351171 |
End bp | 351878 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644933950 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_003090588 |
Protein GI | 255530216 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000148363 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGGCAG CTTCCATAAA GAAAATTTTA ATCCTGGTCA CCATATTAGC GGTACCAGGA TTTTTATATA ATTTACTAGT GGAAAAGGGT AAGAACCGTT ATAAGCCACT GCCTTTTTTT GGGCCTAAAG AAGTGGCTTC AACATTCCAC TCTGTACGGG GGAAACAGGT GCCGGATACC GTTTATCACC AGGTGGGTGA TTTTAAACTG CTGAACCAAA ATGCGGACAC CATAACGGTA AAGCAATACG ATGGCAAAAT AGTTGTGCTA AACCTTTTTT ACACCCAAGG CGATACCTAT AGTGTTAATG TAGCAAACAA AGCCATGAAA GCTTTTGAAA CAACTTACCA TAAAAATAAA GTTGTGAATT TTGTAGGCTT AAGCATTGAT CCGAAAAACG ATACGCCTGA GGTTCTGAAC AAATACGCTA CTGTACTTGC TGCAAAACCC GGAAAATGGG ATTTACTTAC CGGAGACAGC ACAACCATAT ATAACCTGAT CAACAAGGGC TTATTTATAG ATGCCCATAA GGAAGTTGTA AACGGCCTGC CGAAATTTGT ATACAGCAAT ATGTTTGTTT TGCTGGATTA TCAGCACCGG ATCAGGGGGT ATTATGAAGC CAGCAGCCAG GAAGCCCTGG CCAAACTGGA TGATGAGATC AAGGTATTGA TTACCGAAGA ATTAAGAAAC AATGAGGACG GAAGATAG
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Protein sequence | MKAASIKKIL ILVTILAVPG FLYNLLVEKG KNRYKPLPFF GPKEVASTFH SVRGKQVPDT VYHQVGDFKL LNQNADTITV KQYDGKIVVL NLFYTQGDTY SVNVANKAMK AFETTYHKNK VVNFVGLSID PKNDTPEVLN KYATVLAAKP GKWDLLTGDS TTIYNLINKG LFIDAHKEVV NGLPKFVYSN MFVLLDYQHR IRGYYEASSQ EALAKLDDEI KVLITEELRN NEDGR
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