Gene Phep_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0280 
Symbol 
ID8251365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp327403 
End bp329049 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content45% 
IMG OID644933929 
ProductGlucose-6-phosphate isomerase 
Protein accessionYP_003090567 
Protein GI255530195 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0655697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCTA CAATAAATTT TACCGAAACC TCTGCGTATA AATACCTTGC CGATCACTTC 
ATCGACATCA ATAAAAAAAA CCTGAAAGAA CTTTTTGCTG AAGATGAATC CCGCTTTGAG
AAGTTTTCTC TTTTATTTGA GGAGATCCTT GTCGATTATT CCAAAAACAG GATTGATGAC
ACCACCCTTG CGCTGCTCAT CCAGCTGGCC CGCGAATGTA AACTTGATGA AGCCATTAAG
GCCATGTTCA GCGGTGAAGA GATCAACCAG ACAGAAGGCC GGCCGGTACT CCACATTGCT
TTGCGCAATC AGCGCAACAA AGAGATCCTG GTAAATGGCA AAGATGTGAT GCCTGAAGTC
TATGCTGTGC TCGATAAAAT GGAAAAATTC AGCAACCAGA TTATTTCAGG TAGCTGGAAA
GGATATACCG GAAAGGCCAT TACCGATGTG GTCAATATTG GCATAGGCGG TTCAGACCTG
GGGCCGGTAA TGGTTACAGA AGCACTGCGC GCCTACAAGA ACCACCTGAA CATGCATTTC
GTTTCCAATA TCGACGGCAC TCACATTGCA GAAACACTTA AAAAGGTTGA TCCGGAAACT
ACATTGTTCC TCATCGCCTC CAAAACTTTT ACTACCCAGG AAACCATGAC CAATGCCAAT
ACAGCGCGCG ACTGGTTTCT GGCAAATGGC GCTAAAAAAG AAGACATTGC CAAACACTTC
GCCGCCTTAT CTACCAACGC CAAAGACGTT TCTGCTTTCG GTATCGACAC CGATAACATG
TTTGAGTTTT GGGACTGGGT AGGCGGCAGG TACTCTTTAT GGAGCGCCAT CGGACTCCCT
ATCGCACTGA GTGTGGGTTA CGACAATTTT AAACAGCTCC TGGCAGGTGC GCATGCAGCC
GATGAACATT TCGAAAATGC TGAATTCGAG ATCAACATTC CTGTTATACT GGCTTTAATA
GGGATATGGT ACATCAATTT CTTTGATGCA GAAACCCAGG CCATTTTGCC TTACGACCAG
TATATGCACC GCTTTGCGGC TTATTTCCAG CAGGGCGATA TGGAAAGCAA TGGCAAACAT
GTAGACCGTA ACGGTCATGA TGTGACCTAC GAAACAGGTC CGGTCATCTG GGGCGAACCC
GGCACCAACG GCCAGCATGC ATTTTACCAG CTCATCCACC AGGGTACCCG AATTATCCCA
TGCGACTTTA TTGCACCGGC ACAAAGCTTA AACCCCATTG GCAACCACCA TCCGATTCTT
TTATCCAATT TCTTCGCACA AACCGAAGCT TTAATGAATG GTAAAACCAA GGAGGAAGTT
GTTGCAGAGC TTAAAAAAGA AGGTAAAACA GCCGAAGAAA TTGAAAAACT GGCTCCCTTT
AAAGTGTTTG AAGGAAACAG GCCAACCAAC TCTATTCTGC TGAAAAAGGT TACACCTTTT
AGTCTGGGTA GCCTCATTGC CCTATACGAA CACAAGATAT TTGTACAGGG TATCATCTGG
AATATCTTTA GCTTCGACCA GTGGGGTGTA GAATTGGGCA AACAACTGGC CAAGAGCATA
TTGCCTGAAC TGGACAATGA TAATGAAGTA GCCTCACATG ATGGCTCAAC AAACGGACTG
ATCAATCAAT ATAAAAGCTG GAGGTAA
 
Protein sequence
MLPTINFTET SAYKYLADHF IDINKKNLKE LFAEDESRFE KFSLLFEEIL VDYSKNRIDD 
TTLALLIQLA RECKLDEAIK AMFSGEEINQ TEGRPVLHIA LRNQRNKEIL VNGKDVMPEV
YAVLDKMEKF SNQIISGSWK GYTGKAITDV VNIGIGGSDL GPVMVTEALR AYKNHLNMHF
VSNIDGTHIA ETLKKVDPET TLFLIASKTF TTQETMTNAN TARDWFLANG AKKEDIAKHF
AALSTNAKDV SAFGIDTDNM FEFWDWVGGR YSLWSAIGLP IALSVGYDNF KQLLAGAHAA
DEHFENAEFE INIPVILALI GIWYINFFDA ETQAILPYDQ YMHRFAAYFQ QGDMESNGKH
VDRNGHDVTY ETGPVIWGEP GTNGQHAFYQ LIHQGTRIIP CDFIAPAQSL NPIGNHHPIL
LSNFFAQTEA LMNGKTKEEV VAELKKEGKT AEEIEKLAPF KVFEGNRPTN SILLKKVTPF
SLGSLIALYE HKIFVQGIIW NIFSFDQWGV ELGKQLAKSI LPELDNDNEV ASHDGSTNGL
INQYKSWR