| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0276 |
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| Symbol | |
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| ID | 8251361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 323303 |
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| End bp | 325285 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933925 |
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| Product | DNA primase |
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| Protein accession | YP_003090563 |
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| Protein GI | 255530191 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.121752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAACC AGGATACCAT AAACAAGATA ATGGACACCG CCAGGATTGA AGAGGTGGTG
GGCGATTTTG TTGCGTTAAA AAAGAGGGGT ACCAGTTTAA TCGGGAATTG TCCGTTCCAC
AATGAGAAAA CCCCATCTTT TAATGTTTCG GTAACTAAAG GGATTTATAA GTGTTTCGGT
TGTGGTAAGG GTGGAGATGC GGTCCATTTT ATTATGGACC ATGAGAAGTA TTCCTATCCG
GAAGCACTGA AATACCTGGC CCAGAAGTAC AATATTGAAG TTGAGGAGAC GGTACAGTCG
CCCCAGAACA TTGAGGCCCA GAATGCCCGT GAAAGTCTGT ACATTGTATC AGAATACGCG
GCTGGTTATT TTGCGAACGA ACTTTGGACC GGCAATGATG GCCGTGCCAT AGGCTTAAGT
TATTTTAAGG AGCGGGGCTT CAGGGAAGAT ATCCTAAAGA AATTTCAGCT GGGTTACTCG
CCCGATGTAT GGGATGCGCT GATCCAGAAT GCAGTAGGTG CCGGGCATAA AGAAGAATAC
CTGGAAAAAA CCGGGCTTGC GATCAGGAAT GATAAGGGTA AGCTGTACGA CCGTTTCAGA
GGGCGTGTGA TGTTCCCGAT CCACAACTTT ACCGGCAGGG TAATCGGTTT TGGTGGAAGG
ACATTAAAGA CGGATAAAAA TGTTCCTAAA TATGTAAACT CTCCGGAGAG TGACATTTAC
CATAAGTCCA ACGTGCTTTA TGGTTTGTAC CATGCCAAAA AAGCGATCAG GGATCAGGAT
AACTGCTATC TGGTAGAAGG TTATGCAGAT GTGCTGGCCG TGCACCAGGC AGGAATTGAG
AATGTGGTGG CTTCTTCCGG TACTTCTTTA ACCACGGAAC AGATCCGGCT GATCGGACGG
TTTACAGAAA ATGTAACGAT TTTGTATGAT GGGGATGCTG CCGGCATCAA AGCTTCGCTG
CGCGGACTGG ATATGATCCT GGAAGAGGGG CTGAACGTGA AAGTGGTACT TTTTCCGGAT
GGGCACGATC CGGACTCGTA CATGCACCAT GTAGGCTCCG GAGAATTTAA GCAGTATATA
GAAGGTAACC GCAGGGACTT TATTTTATAT AAAGCTACGA TTTTACTGAA AGAAGCCGGT
ACCGACCCCA TAAAAAGGGC TGGGATTATC AGGGACATTA TAGAGAGTAT TGCGAAGATA
CCAGATGACA TTAAGGCCGC TGTATTTATA CGTGAATGCA GTAGCTTATT GCAGGTTGAA
GAAAGGATCT TGCTTTCAGA GCTCAATAAA ATGAGAGCGG CAAAGCTTAA GAAAGCTTCA
GGAGGCAGCT CAAGTCCGCA ATCACAATCT TTTCAGCAGC ACCAGCAGGC ACAGCAGCAT
GCAGAGGGGC CACCTGATAA TCTTTTTGAA AATCCGGGCC CTTATGAAGA TCCGGGTCCG
GAAACTGCAG CAAGCAATGA TCTCATTCAG GAACAGGAAA TCGTTCGACT GCTGCTGGCT
TATGGGCATG AACTGGTAAA CTGGGACGGC ATAGACAATA TGTACATTGG TTCGTTCATT
ATACAGAACC TGACAGACGT GGTATTTGAA GACCAGCTTT GCAGCGGCAT CATAGAGAAT
TACAGGGAAG AAATCGAGAA CGGGCATTTG CCTGTTGCCA GCCAGTTTAT CAAAAGTCCG
GACCGTAATA TTGCTGAACT GGCGATTACA CTATCCACAT CCCCTTATAT ATTAAGTGAG
AACTGGGAAA ATAAGCATAA CATTTATGTA AGGGACGAGA CCGTAAACCT GAAGGCAACG
ATTTTGGGCG GCTTGTTTCA CCTGAAAAAA ACGAAAATTG CCGGTATCCT TTCGGCAATT
TCCAAAGAAA TAAAAACAGA AACAGATCCG GTGAACCTGG AAATCCTGAT GCAAAGGTTT
GTATTGATGA AGGGCGTTGA GCGTGAGATT TCCAAGCACC TGGGCATCAC AATTTTAAAA
TAG
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| Protein sequence | MINQDTINKI MDTARIEEVV GDFVALKKRG TSLIGNCPFH NEKTPSFNVS VTKGIYKCFG
CGKGGDAVHF IMDHEKYSYP EALKYLAQKY NIEVEETVQS PQNIEAQNAR ESLYIVSEYA
AGYFANELWT GNDGRAIGLS YFKERGFRED ILKKFQLGYS PDVWDALIQN AVGAGHKEEY
LEKTGLAIRN DKGKLYDRFR GRVMFPIHNF TGRVIGFGGR TLKTDKNVPK YVNSPESDIY
HKSNVLYGLY HAKKAIRDQD NCYLVEGYAD VLAVHQAGIE NVVASSGTSL TTEQIRLIGR
FTENVTILYD GDAAGIKASL RGLDMILEEG LNVKVVLFPD GHDPDSYMHH VGSGEFKQYI
EGNRRDFILY KATILLKEAG TDPIKRAGII RDIIESIAKI PDDIKAAVFI RECSSLLQVE
ERILLSELNK MRAAKLKKAS GGSSSPQSQS FQQHQQAQQH AEGPPDNLFE NPGPYEDPGP
ETAASNDLIQ EQEIVRLLLA YGHELVNWDG IDNMYIGSFI IQNLTDVVFE DQLCSGIIEN
YREEIENGHL PVASQFIKSP DRNIAELAIT LSTSPYILSE NWENKHNIYV RDETVNLKAT
ILGGLFHLKK TKIAGILSAI SKEIKTETDP VNLEILMQRF VLMKGVEREI SKHLGITILK
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