| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0220 |
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| Symbol | |
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| ID | 8251305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 256620 |
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| End bp | 259034 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933870 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003090508 |
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| Protein GI | 255530136 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.831409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAAAT ACGCATTTTT AATTTTCAGC CTCCTTCTCG GCCTTGTTTC TCTGAATGGA
TATGCCTTTA CCGAAAAGGG GGTAATTACC GGAAAGGTGG TGGAAGAAGT GGGTGGTCTG
CCCATACCTT CGGCCGTAAT AGCCGTTTAT GAAACCGGTT CTGAACACCC TTTGGTAACC
ACCGCAACAG ACGAAAATGG TATTTTTAAA TTTAATGCCC TAAAATACGG TACCTATAAG
GTAAAGGTAA GCTTTGTTGG CTTCGCCAGC CTAACCGTAA ACGAGGTTAT CCTTACCGAA
AAAGATTTTG AACGTAACCT GGGCACCTTA AAACTGGGCA GCGACCAGAA CAACTTAAGC
GAGGTTACCA TTACCGCCGA AAAGCCGGTG ATAGAGTTTT CGGCAGATCA GATCACCTAT
AACGTAGATA AATCTATCCT CGCCGAAGGA AGCACCGCTA CCGATATCCT CAAAAATGTC
CCTATGGTGC AGGTCGATAT TGACGGCAAT GCCAGCATTT CCGGAAAACG CGCTACCCGC
ATCTTCATCG ATGGCAAACC TTCGGATTAC ATGACTTCCA ATATTGCCGA CCTGTTAAAC
GTGCTGCCTT CTGATGCGAT TGAAAAAATA GAAGTCATGA CCAACCCACC GGCCAGGTAC
TCAGGCGATG GGGAAGGCAT CATCAATATT GTGATGAAAA AGGGTTTTGC CATTGGTTTT
AATGGCAATG CCGGTATAAC AGCTGGTCTG CAAGGCAATA CCAATATGAA CTCAAACGCT
TCCTACCGCA GTAAAAACTA TTCTTTAAGC GGAGGTGCGG CCTACAGAAG CAATATAGGC
CGAAGCAGTT CGCACAGCTA CCGCGAAAAC TTTGACCTGG TTAAAGACAC TACTTTTTAT
TACGACAATT ATAGCAATAG CAAAAGTAAC AGCAATGGCG GTAATTTCAG GGCGGCACTC
GACTGGGACA TTAGTCCGCA GCAAAACTTT CGTGTAAATA CCAATTTCAA TACCAACAGC
AGCAGCAGCA GGGCCGGTAC AGATTTCAAT TTTTTAAGTG AAGAACTCGA CCTGAGACGT
GTACGTAACC AGCTAAGTAC AGGTGACGGA ACCAGTCATA ATTTTGTTTT TAATGCCGAT
TATAGCCTGA AAGCAACAGA AAGCGGTGAA AAGCTGACCC TGGGCTTAAC CTTTAACAAC
AATGATAACG ACAACCTGCG TTTGCTGGAC CAGCATTACA CCCTGCCCGT AACCGCCAAG
CCTTCGCTAC GCGAAAATAC CACTGGTATC GGCAATAACG GCCTTACCAT TAACCTCGAT
TACGACCGCC CTGTTTTTAA AAAACGTGAT CAGCTGGAAG CCGGGATCAT GTACAGTTAC
AGGAAAAACA ACAACGACAT GCTGGTCCGG GATTTTGATT TTGATGCGCA GCAATATGTG
GTTGCCGAGA AGCTGACCAA TGAGTTTTTA TACAATGAAG GTATTCTTGC CGGATACGCC
TCCTACAATT ACAGGGGAAA GGGTATTGGC GTTAAAACAG GTCTGAGAGC CGAACTAACA
GATGTCAACT TCGATCTTTC TACCGGCAGC AGTTACCACA TCAACCCTTA CCTAAGCCTG
TTCCCAACCA TTTCTGTTAA CCATTTTTTT AAAAAAAGAT ACAATATCGG GGCTACTTAC
AGCGTCAGGA TCAACCGGCC TAGAGAGAAT ACCTTAAACC CGCAGATCAA CGACAACGAC
ACCTTAAATG TCTCTTATGG CAACCCTGAT CTTATCCCTG CTTATACCCA CCAGATGGAC
ATCAGCTTTG GGGCTTTTGG CGAAAAATGG TCATTTACCC CCCGCCTGTC TTATTCTACC
AGCAACGGCG TCATCGAACG TTACCGCGCA GTGAGTGTTG TAAATGGGGT AGCCAAATCA
GAAACCACCT TTTACAACGT AGGCTCCAAT AACATTTTCG GCCTATTCCT GATCGGAAAC
TACCGGCCAA ACAAAAAACT CTCGGCCAAT GCCAATTTAA CACTTACACA AAGCAGTTAT
ACCTCCACTT TAAATTCGGC CTTAAACCGG AAGGGTTTAA GTGTACGCAG TGCTGTAGGC
TTGTCTATGC AACTGCCCCT AAAAACCGCT TTCGAAGCCA ATGTAAACTA TGCCAACAAT
GTAAACGCCC AGGGTCGGGC CAAAGGTTCG GTAAGCTCTG CCATGGCTGC CCGAAAAATG
TTCCTTAAAA ACAGGCTCAG CACCCGCATC AGCCTTAGCG ATCCTTTTGG AAAACGTAAC
TACACCTTAT TTAGTGAAGG CAGTAATTTC AGGTTACAAA GCTTTTCCGA AAGCAATACC
AGCAACGTTA CCATCAGTCT GAATTACCGC TTTACAAAAA TTAAAAAAGT GCCTACTCCG
CCTAAAGCAG ATTAG
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| Protein sequence | MKKYAFLIFS LLLGLVSLNG YAFTEKGVIT GKVVEEVGGL PIPSAVIAVY ETGSEHPLVT
TATDENGIFK FNALKYGTYK VKVSFVGFAS LTVNEVILTE KDFERNLGTL KLGSDQNNLS
EVTITAEKPV IEFSADQITY NVDKSILAEG STATDILKNV PMVQVDIDGN ASISGKRATR
IFIDGKPSDY MTSNIADLLN VLPSDAIEKI EVMTNPPARY SGDGEGIINI VMKKGFAIGF
NGNAGITAGL QGNTNMNSNA SYRSKNYSLS GGAAYRSNIG RSSSHSYREN FDLVKDTTFY
YDNYSNSKSN SNGGNFRAAL DWDISPQQNF RVNTNFNTNS SSSRAGTDFN FLSEELDLRR
VRNQLSTGDG TSHNFVFNAD YSLKATESGE KLTLGLTFNN NDNDNLRLLD QHYTLPVTAK
PSLRENTTGI GNNGLTINLD YDRPVFKKRD QLEAGIMYSY RKNNNDMLVR DFDFDAQQYV
VAEKLTNEFL YNEGILAGYA SYNYRGKGIG VKTGLRAELT DVNFDLSTGS SYHINPYLSL
FPTISVNHFF KKRYNIGATY SVRINRPREN TLNPQINDND TLNVSYGNPD LIPAYTHQMD
ISFGAFGEKW SFTPRLSYST SNGVIERYRA VSVVNGVAKS ETTFYNVGSN NIFGLFLIGN
YRPNKKLSAN ANLTLTQSSY TSTLNSALNR KGLSVRSAVG LSMQLPLKTA FEANVNYANN
VNAQGRAKGS VSSAMAARKM FLKNRLSTRI SLSDPFGKRN YTLFSEGSNF RLQSFSESNT
SNVTISLNYR FTKIKKVPTP PKAD
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