Gene Phep_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0191 
Symbol 
ID8251276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp222184 
End bp222825 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content40% 
IMG OID644933841 
Productprotein of unknown function DUF47 
Protein accessionYP_003090479 
Protein GI255530107 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.170479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCA TTTTTAAGTT CTTTACCCCG AAAGACAAGA AATTTCAGCC TTTATTTGAA 
CAGGCAGGAA GCAATGTATT AAAGATTTCC CAGGCATTAT TGCTTGCGCT TAGTGCAACT
GATATGGAGA AAAGGAAAGA ACACATTAAA GAAGTGGAAC GTTTGGAGCA TGTTGGCGAC
GACATTACCC ACTCCATTTT CCTTGAATTG AGTAAAAATT TCATTACACC TTTTGACAGG
GAGGATATCC ATGCCCTGGC CAGCGCAGTA GATGATATTG CAGATTATAT CCACGCATCG
GCCAGCAATA TAGAATTGTA CAATGTAACC AACATTGGTG ATGCCATGAT CAAACTGGCA
GAATTGCTGG TAGAAATGTG CACTGACCTT GAAAAAGCCA TTAAAGAACT AAGGAGCTTT
AAAAACATCC GTGTAATTGC TGATGCCTGC GTACGCATCA ACAGCGGAGA AAACCAGGCT
GATTATGTAT GTAACCTTGC CATTGCCCGA TTGTTTGAGT TTGAGACCAA TGCCATTGAG
CTGATCAAAC AGAAAGAGGT ACTGCAGACT TTAGAACTGG CTACAGATAA ATGTGAAGAT
GCAGCAAATG TGCTGGAATC TATTTTGGTA AAGAACGCTT AA
 
Protein sequence
MNSIFKFFTP KDKKFQPLFE QAGSNVLKIS QALLLALSAT DMEKRKEHIK EVERLEHVGD 
DITHSIFLEL SKNFITPFDR EDIHALASAV DDIADYIHAS ASNIELYNVT NIGDAMIKLA
ELLVEMCTDL EKAIKELRSF KNIRVIADAC VRINSGENQA DYVCNLAIAR LFEFETNAIE
LIKQKEVLQT LELATDKCED AANVLESILV KNA