Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0154 |
Symbol | |
ID | 8251239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 183117 |
End bp | 184454 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644933804 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003090442 |
Protein GI | 255530070 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.436369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATT CTACTTTAAA AAAGGGTCTA GCAGCTTCTT TTGTAGCATT AATAGGAGTA ACAACTCTTG CTAATGCTCA GGACGCTTCG ACTTCTTCTT CTTCAGCCAA GGTATTTGGT GGAAGAGGTC AGTACAGGAC GTGGTCTTTA GGTGTTAACG GTGGTGTTTT ATCTCCATTT GTTGCTATCG GCGGATCAAA CGACTTTACT AACTTCGACG TTAACTTAGG TTACGGTATC TCATTGAGAA AACAATTGGG TCATGCATTT GGCTTAGAAG GTAACGTTTT CCGTGGAAAA GTTTCCGGTA CTAACAAAGA TGCTCCAGGT GGTGCAGTAA ATGGTATCAG AGAATTCGAA ACTGAATTGG CTTATGCTAC TGACTTAAGA GGTGTTGTTA ATGTGGCAAC TGTTGACTTT TTACGTCGCG AAAACTCAGT TAACTTCTTC GTAACTGCTG GTTATGGTGT TGCTGCTTAC AGAACTGCAT TAAACGGTGC TGACATCAAA AACTTACCAG AAAACAAAGG TGATAACGGA GACAAAAAAT ACATCAAAGA AGCTTATATC CCAGTTGGTG CTGGTATTAA ATTCAAAGTT TCTGAGCGTG TATCATTTAA CTTAGGTTAT ACCATGCACT TTATCGACGG AGATAACTTT GACGGAGTTT ACGCTAAAGC AACTTCTAAA GATAAATTCT CTTACGGATA TGCTGGTTTA GAATTCTCTT TAGGATCTAA ATCTAAACCG AACCTGGATT GGGTTAACCC ATTGGCTTTA ATGTATGATG AATTGAAAGA TCCTTCATTA CGTCAGGAAG TTGAAGCTTT GAAAAACCGT GTGTCTAACA TTGAAAAATC TGTTGAAGAT TTGAAAAAAG ACAGCGATGG TGACGGTGTA GCTGATCAGT TTGATAAATG CCCAGGTACT CCGGCTGGTA CTGCTGTTGA TGGTTCAGGA TGTCCTCTAC CTAAAGCACC AGAGCCTACT GTAAAAGACC AAAGCACTTT AACTGGTTTT GAAACTATCC AGTTTGAATT TAACTCTTCA GTTTTAAAAA CTGATTCTTA CCCTACTTTA GATAAATTAT CTTCAGTATT GCGTGAAAAC GGTGGTAAAG TAACTGTAAA AGGTTATGCT TCAAGCGAAG GTACTGCTGC ATACAACCTG AAATTATCTA AAGACAGAGC AAATTCTGTT AAAACTTACT TAGTGAACTC TGGCGTTAAT GCTAGTCAGG TTGTAACTAA AGGTTATGGT GAAGCTAATC CAATTGCTTC TAACGATACT GAAGAAGGTC GTATCCAAAA CCGTCGTGTT GAATCATCTA GAAACTAA
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Protein sequence | MNYSTLKKGL AASFVALIGV TTLANAQDAS TSSSSAKVFG GRGQYRTWSL GVNGGVLSPF VAIGGSNDFT NFDVNLGYGI SLRKQLGHAF GLEGNVFRGK VSGTNKDAPG GAVNGIREFE TELAYATDLR GVVNVATVDF LRRENSVNFF VTAGYGVAAY RTALNGADIK NLPENKGDNG DKKYIKEAYI PVGAGIKFKV SERVSFNLGY TMHFIDGDNF DGVYAKATSK DKFSYGYAGL EFSLGSKSKP NLDWVNPLAL MYDELKDPSL RQEVEALKNR VSNIEKSVED LKKDSDGDGV ADQFDKCPGT PAGTAVDGSG CPLPKAPEPT VKDQSTLTGF ETIQFEFNSS VLKTDSYPTL DKLSSVLREN GGKVTVKGYA SSEGTAAYNL KLSKDRANSV KTYLVNSGVN ASQVVTKGYG EANPIASNDT EEGRIQNRRV ESSRN
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