| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0126 |
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| Symbol | |
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| ID | 8251211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 151649 |
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| End bp | 153199 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644933776 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003090414 |
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| Protein GI | 255530042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTAAAGG AACTAATTAT AGATTCATCT CCTTCGGGAG TAACCATAGC TTTAGTTGAA
GACAAACAAC TTGTAGAACT CCATAAGGAG CAGATCAATA ACAATTACGC TGTAGGCGAC
ATTTATTTAG GCCGCATAAA GAAAATTATG CCGGGCCTAA ATGCTGCGTT TGTTGATGTT
GGTTATGAAA AGGATGCTTT TTTGCATTAC TTTGATCTTG GTCCGCAAGT ACAATCTTTA
ATAAAGCTTA CGAAAATCAA GCGTAATGGC TCTGTTAACG GCACTTTATT AGATAATTTC
AAATTAGAGG GTGACATTAA CAAAGCAGGA AAAATATCAG AGGTGGTAAG TAAGAACCTC
GTTTTGCCTG TCCAGATCGC TAAAGAGCCC ATCTCAACAA AAGGACCCCG TTTAAGTTCT
GATCTTTCGA TTGCCGGAAG ATATATTGTA TTGGTGCCCT TCTCAAATGT GATCTCTATT
TCCAAAAAGA TTAAGAGCAA TACTGAACGT AATCGTCTTA AAAAGATTAT TGAAAGTATT
AAACCTAAGA ATTTTGGCGT GATCATCCGA ACGGTATCAG AAGGCAAGGG TGTTGCCGAA
CTTCAGAAAG ACCTTTTAGA TTCGGTAGCC AAATGGGAAA ACTTCATTAA GAAGTTGCCC
GATGCGGAGC CTTCTAAACG TGTTTGGGGA GAAATGGACC GGACTTCGAC ACTGATCCGT
GATATTTTGA GTACCGATTT CACGAATGTA TATGTAAGCG ACAACAATCT GTTCGAGGAT
ATCCGCTCTT ATGTACATGA GATCTCTCCG GAAATGGAGA AGATTGTAAA ACTGTACAGA
CATAAAGAGC CTATATTTGA ACACTTCGGG ATTGAGAAGC AAATTAAAAA TGCTTTTGGG
AAAACGGTAA ACCTGGCTGG TGGTGCCTAC CTGGTGGTAG AGCATACTGA AGCCTTGCAC
GTAATTGACG TAAACAGCGG CAACAGAACG GCCAGCAAGG AAAATCAGGA AGAGAATGCC
TTACAGGTAA ACAAAGAGGC GGCAAAAGAG ATTGCCCGCC AGCTGCGTTT GCGTGATATG
GGTGGTATTG TGGTGATCGA TTTTATTGAT ATGCACAAAC CGGCAAACAG AAAAATGCTG
TTTGACCATT TGAGGGACCT GATGCAGTTA GACCGCGCCA AACATACCAT ATTACCACCA
AGTAAATTTG GGCTGGTCCA GATCACCCGT CAGCGTGTAC GGCCGGAGAT GAACATTGTG
ACCAGTGAGA AATGCCCGGC CTGTGACGGG ACGGGAGAAA TTAAGGCAAG CATTGTTTTG
ATGGATGACA TTGAAAACAA TCTGACCTAT ATTTTGCAGG AGCAAAACGA AAAAAATATT
ACGCTTTGTG TGCACCCTTA CATTGAAGCC TACATTAAAA AAGGATTTAT TTCTTTACAG
TGGAAGTGGT TCTTTAAATT TGGACAGCGC ATAAAGATTA AAGCTGTGCC TTCGTATAAC
CTTACTGAAT TCCACTTTAT TTCGTCAAAG GACGAAGAGA TCAAATTATA A
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| Protein sequence | MVKELIIDSS PSGVTIALVE DKQLVELHKE QINNNYAVGD IYLGRIKKIM PGLNAAFVDV
GYEKDAFLHY FDLGPQVQSL IKLTKIKRNG SVNGTLLDNF KLEGDINKAG KISEVVSKNL
VLPVQIAKEP ISTKGPRLSS DLSIAGRYIV LVPFSNVISI SKKIKSNTER NRLKKIIESI
KPKNFGVIIR TVSEGKGVAE LQKDLLDSVA KWENFIKKLP DAEPSKRVWG EMDRTSTLIR
DILSTDFTNV YVSDNNLFED IRSYVHEISP EMEKIVKLYR HKEPIFEHFG IEKQIKNAFG
KTVNLAGGAY LVVEHTEALH VIDVNSGNRT ASKENQEENA LQVNKEAAKE IARQLRLRDM
GGIVVIDFID MHKPANRKML FDHLRDLMQL DRAKHTILPP SKFGLVQITR QRVRPEMNIV
TSEKCPACDG TGEIKASIVL MDDIENNLTY ILQEQNEKNI TLCVHPYIEA YIKKGFISLQ
WKWFFKFGQR IKIKAVPSYN LTEFHFISSK DEEIKL
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