Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0125 |
Symbol | |
ID | 8251210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 150070 |
End bp | 151446 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644933775 |
Product | DNA repair protein RadA |
Protein accession | YP_003090413 |
Protein GI | 255530041 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAAAA CAAAATCAGC ATATTTTTGC CAGAGCTGCG GATACGAATC AGCAAAATGG CTGGGCAAAT GTCCGTCCTG CAATGAGTGG AATACTTTTG TGGAAGAGGT TATTGAAAAA GCAGCTGCTA AAGTGCCCGC CTGGAAAACA AGTACCGGTA CCCAGCGCGT TAGTAAGCCC AACAAGGTAG ACAATATCCA GTCTATAACC GAAGAACGCA TTTTGACCGG CGATACAGAG CTTGACCGGG TTTTGGGCGG GGGCCTTGTT GCTGGTTCTG TTATTTTGAT CGGCGGTGAG CCTGGCATTG GCAAATCCAC TTTAATGCTG CAGCTGGCCT TAAACATTTC GGGCAAAAAG ATTTTGTATG TATCCGGAGA GGAAAGTGAA CAGCAGATTA AAATGCGGGC AGAGCGGATC ACTGTACAGC CCATGGCAGA TTGCTACATC CTGACAGAAA CTTCCACACA AAATATATTT AAACAGATAG AAGAGCTTGA GCCCGATATT GTGGTTGTCG ATTCGATACA GACCCTGCAT TCGGCACACA TAGAATCTAC CCCGGGCAGC GTGTCGCAGG TAAGGGAGTG TACGGCCGAG TTGCTGCGTT TTGCAAAGGA GACGGATACC CCGGTATTTC TAATAGGCCA CATTACCAAG GACGGAACGA TTGCTGGGCC CAAAATACTG GAACATATGG TGGATACCGT TTTACAATTT GAGGGCGACA GGCACCATGT ATACCGGATA TTGCGGTCGA TAAAAAACAG GTTTGGTGCT GCAGCCGAGC TTGGGATCTA TGCCATGCAC AGCAGCGGAT TGAGGCAGGT TTCCAACCCA TCAGAAATAC TGCTTTCCCA GCGGGATGAA GAGCTGAGCG GAATTGCCAT ATCGGCCACT TTAGAGGGCG CCAGACCAAT GTTGATTGAA ACACAGGCCC TGGTGAGTGC GGCAGCCTAT GGAACCCCCC AGCGGTCCTC AAATGGCTTC GATACCAAAA GGATGAACAT GCTGCTTGCC GTGCTGGAAA AAAGATGCGG GTTCAGATTG AGCACAAGAG ACGTATTTTT AAATATTGCC GGCGGAATAA AGGTAGAGGA CCCGGCTATT GACCTGGCCA TCCTGGTGGC CATTATCTCT TCTCATGAGG ATATATTTAT TTCTTCAAAA ATATGCTTTG CTGCTGAAGT TGGCCTTTCT GGCGAGATCA GGGCGGTAAA CCGAATTGAA CAACGCATTT CTGAAGCAGA AAAGCTTGGT TTTGAACGGA TCTTTATTTC TAATTACAAC AGGAAAGGGC TGGTAGTTGA ACGTTATAAG ATTGAGTTGA TTGCAGTGAG CAAAATAGAA GATGTTTTCT CCCAGTTATT TGGATAA
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Protein sequence | MAKTKSAYFC QSCGYESAKW LGKCPSCNEW NTFVEEVIEK AAAKVPAWKT STGTQRVSKP NKVDNIQSIT EERILTGDTE LDRVLGGGLV AGSVILIGGE PGIGKSTLML QLALNISGKK ILYVSGEESE QQIKMRAERI TVQPMADCYI LTETSTQNIF KQIEELEPDI VVVDSIQTLH SAHIESTPGS VSQVRECTAE LLRFAKETDT PVFLIGHITK DGTIAGPKIL EHMVDTVLQF EGDRHHVYRI LRSIKNRFGA AAELGIYAMH SSGLRQVSNP SEILLSQRDE ELSGIAISAT LEGARPMLIE TQALVSAAAY GTPQRSSNGF DTKRMNMLLA VLEKRCGFRL STRDVFLNIA GGIKVEDPAI DLAILVAIIS SHEDIFISSK ICFAAEVGLS GEIRAVNRIE QRISEAEKLG FERIFISNYN RKGLVVERYK IELIAVSKIE DVFSQLFG
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