| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0112 |
|---|
| Symbol | |
|---|
| ID | 8251197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 134398 |
|---|
| End bp | 135222 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644933762 |
|---|
| Product | ribosomal protein S2 |
|---|
| Protein accession | YP_003090400 |
|---|
| Protein GI | 255530028 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000610418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA CTACATATCA AGACTTATTG GATGCAGGTG TACACTTTGG TCACCTTACC
CGTAAATGGA ACCCAAAAAT GGCCCCATAT ATTTTCATGG AGCGCAACGG TATCCACATT
ATAGATTTAA ATAAAACTTT AACTAAAACT GAAGAAGCTG CTTCAGCGAT CAAACAGATC
GTAAAATCTG GTCGTAAGAT CTTATTTGTA GCGACGAAGA AACAAGCTAA AGAAATTGTT
GCCGATCAGG CGAAAAAAGT AAATATGCCT TACGTAACCG AGCGTTGGTT AGGTGGTATG
TTAACCAACT TTGCTACTGT ACGCAAGTCG ATCAAAAAGA TGTCTAACAT CGATAAAATG
ACTAAAGACG GTACTTATTC GATCCTTTCT AAGAAAGAGC GTTTAATGAT CCAGCGTGAG
CGTATCAAAT TGGAAAGCTT ATTGGGTGGT ATTGCAGACT TAAACCGTTT GCCAGCTGCT
ATCTTTTTAA TTGACGTTAA AAAAGAGCAC ATCGCTGTTA GTGAAGCGTT GAAATTAAAC
ATTCCAACTT TTGCAATGGT AGATACCAAT TCTGATCCTT CAAACATCGA TTTCCCAATC
CCTGCGAATG ATGACGCTAC TAAATCGATC TCTTTAATTA CTGATGTGAT CATCAAAGCA
ATTGAAGAAG GTTTAGATGA GCGCAAACGC GAAAAAGATG AAGAAACCGA AAAAGAAGCT
GTAGCTGCTA AAGCTGCTGC TGATGCCCCT GAAGCTGCTG CTCCTGGTGC AAGAAGGAAA
AAAGTTGAGG CTGAGACCGA AGAAGGTACA AGCGAAGAAG CTTAA
|
|---|
| Protein sequence | MARTTYQDLL DAGVHFGHLT RKWNPKMAPY IFMERNGIHI IDLNKTLTKT EEAASAIKQI
VKSGRKILFV ATKKQAKEIV ADQAKKVNMP YVTERWLGGM LTNFATVRKS IKKMSNIDKM
TKDGTYSILS KKERLMIQRE RIKLESLLGG IADLNRLPAA IFLIDVKKEH IAVSEALKLN
IPTFAMVDTN SDPSNIDFPI PANDDATKSI SLITDVIIKA IEEGLDERKR EKDEETEKEA
VAAKAAADAP EAAAPGARRK KVEAETEEGT SEEA
|
|---|
| |