| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0110 |
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| Symbol | |
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| ID | 8251195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 133538 |
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| End bp | 133981 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644933760 |
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| Product | ribosomal protein L13 |
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| Protein accession | YP_003090398 |
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| Protein GI | 255530026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00100259 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATACGT TAAGTTACAA AACTGTCTCT GCCAATGCAA AAACTGTTAA CAAACAGTGG
GTTGTTGTGG ATGCTGAAGG CGAGATTTTG GGGCGCTTGT CATCGAAGAT CGCTATGATC
ATCCGTGGTA AAAACAAGCC TGAGTACACC CCACACGTAG ACTGCGGTGA TAACGTTATT
GTTATTAATG CAGACAAGAT CAAGTTGACC GGGAATAAAT TTTCTGAGAA AGTTTACATT
TCTTATACTG GTTATCCAGG TGGTCAGCGT TTCATTTCTC CAAAAGAGTT AATGGCGAAA
CATCCTAAGC GTGTTATCGA GAAAGCTGTT CGTGGTATGT TACCTAAAAC TAAGCTTGGT
GCAAAATTGT TCACCAACCT TTTTGTTTAT GCAGGTGCAG AACATCCTCA TGCGGCGCAA
TCACCAAAAA CCATTAAACT TTAA
|
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| Protein sequence | MNTLSYKTVS ANAKTVNKQW VVVDAEGEIL GRLSSKIAMI IRGKNKPEYT PHVDCGDNVI
VINADKIKLT GNKFSEKVYI SYTGYPGGQR FISPKELMAK HPKRVIEKAV RGMLPKTKLG
AKLFTNLFVY AGAEHPHAAQ SPKTIKL
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