Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0109 |
Symbol | |
ID | 8251194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 131624 |
End bp | 133381 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644933759 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003090397 |
Protein GI | 255530025 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.012333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAA CCCTGCCATT GGTATCAACC ATTTCCATAT TGCTATTAAA TCTGGGCATT GTACAGGCGC AATATATTTT GAAAGAAGCA GATCAGCAAT TTGACCTGTT TAATTACGAT AAGGCAATAA ATTTATATAC ACAGGCGTAT AAAAAGAAAG CTACTTTACA CACTGCAGAG CGCCTGGCAG AGGCTTATCA GCTGAAGAAC GATTACCTGG CCGCGGAAAG CTGGTATGCC CTTGCTGCCA GGTTGCCAGG CAGTAAAAAT GAAAACACTT TATATTACGC AATGGCGCTG CAGCAAAATG CTAAATACAG CGAAGCCAAA GCACAATATT TAAATTATTT TGCCAAAGAA AACACCATTT CTTCAGTCAT AAAAAACAAT TTGCTGGCTT CCTGTGATTC TGCGGAAAAC TGGATGAAAA ACCCGGCCCA GATCCAGGTC AATAACCTCG GTGCCCTAAA CGGGCCGCAA TCAGACTGGG GTAGTGTAAT TTATCAGGAT GCAATGGTAT TTGCTTCTGA CAGAATAAAT ATAGGTAAGG CGAATGTAAA AGCACCGTTT TTAAAATTTG ACGGCACTAA ATTTCCTGAT AGAAAAATTT ATGGCTGGAC AGGAAGCGGG TACCTTAAAC TTTATACCCA ACATGGTGCT GATAGTGTCC GGGTTTTTCC TGTTAACGCA AAAACCAATT ACCATATTGG CGCGGCAAGT TTTACGGCCG ATGAAAATAC CATGTACTTT ACTTTGACCC GGATACCTGA AAAGCCGGGT AGGGGAAAAG ACAACATTGC AACCATTAAT GTAGAAATTT ACAGCAGCAA AAAAAACGCT GGAAAGTGGG AAGAAGCCAT TCCCTTTAAA TACAATAAGG CGGATGCGTA TTCGGTTGGT GATCCGTTCA TCTCCAAAGA CGGGAACAGG CTTTATTTTG TTTCAGATAT GCCGGGTGGT TTGGGCGGAA CAGATATTTA CTACGTAGAA AAGCTTCAAT CTGGCGAATG GGGAGATGCG GTAAATTTGC AGGAAGTAAA TTCTGCCGGA AATGAGCGCT GCCCTTTTGT AGCCAATAAA AATACATTTT ACTTTTCTTC AGATGGAAGG ATAGGAATGG GTGGCCTGGA TATTTTTAGG CTTTCAAAAA ATGCCACAGG AGAAAATAAG ATCGAAAATT TAGGATTCCC GGTTAATTCC CCCCAAGATG ATTTTGCATT TAATACCGAT GTAAATACCG GGATATCCTA TTTTTCTTCA AATCGTTTTG GTGGCAAGGG TAGTGATGAT ATCTACAGTA TGGAACGCCA GGTAACCAAC AGTCCCGTCC TTATCGCAAA AGAACCAACA GATCCCGGAA CCCTTAATAA GAAGGAGTTC CTTCAAACAA AGGAAAACAA CAAGCCCATC AGACTGGAAA ACATCTATTA CGACTTCAAT AAATGGGACA TAAGGGCCGA TGCTGCTGCG GAACTGGAAA AACTGGTGCA GATCATGAAA GACAATTCCA GGATCTGGAT TGAACTGGGC TCACATACCG ACAGCAGGGG AAACGATGCC TATAATTTTA CCTTATCGCA AAAAAGGGCC GAATCTGCTG TTACTTACAT GATTTCAAGG GGAATAGAGA AAAATAGGAT AGAAGCCAGA GGATATGGGG AAACGCTATT GTTAAACCGT TGTGCAAATG GTATAAAATG CACTGAAGAG GAGCACCAGT TAAACAGAAG AACGGAATTT AAAATAACAG CCTGGTAA
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Protein sequence | MKRTLPLVST ISILLLNLGI VQAQYILKEA DQQFDLFNYD KAINLYTQAY KKKATLHTAE RLAEAYQLKN DYLAAESWYA LAARLPGSKN ENTLYYAMAL QQNAKYSEAK AQYLNYFAKE NTISSVIKNN LLASCDSAEN WMKNPAQIQV NNLGALNGPQ SDWGSVIYQD AMVFASDRIN IGKANVKAPF LKFDGTKFPD RKIYGWTGSG YLKLYTQHGA DSVRVFPVNA KTNYHIGAAS FTADENTMYF TLTRIPEKPG RGKDNIATIN VEIYSSKKNA GKWEEAIPFK YNKADAYSVG DPFISKDGNR LYFVSDMPGG LGGTDIYYVE KLQSGEWGDA VNLQEVNSAG NERCPFVANK NTFYFSSDGR IGMGGLDIFR LSKNATGENK IENLGFPVNS PQDDFAFNTD VNTGISYFSS NRFGGKGSDD IYSMERQVTN SPVLIAKEPT DPGTLNKKEF LQTKENNKPI RLENIYYDFN KWDIRADAAA ELEKLVQIMK DNSRIWIELG SHTDSRGNDA YNFTLSQKRA ESAVTYMISR GIEKNRIEAR GYGETLLLNR CANGIKCTEE EHQLNRRTEF KITAW
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