Gene Phep_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0088 
Symbol 
ID8251173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp100922 
End bp101689 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content42% 
IMG OID644933738 
Productphospholipase/Carboxylesterase 
Protein accessionYP_003090376 
Protein GI255530004 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGTAG ATAAATTGAA ATTGGTTATT GCCTTCATCC TGGCTTGCCA GTCTGTAAAA 
GCACAACAAA TTTCAACATA TACAAAGGAT GTGTATGTAA CATCGAAGGA CAGCTTACCT
TATAGGCTTT TATATCCGTT AAACTATAAT AAGAACAAGA AATATCCAAT TGTTGTTTTC
TTGCATGGAT CTGGGCAACG TGGAAATAAT AACGAGGCCC AGTTAACCGG AGTGCCAAAA
CGTTTAACAG ATTCTGCAGG AAGGGTGAAA TATGCCTGCT TTATTCTTGC ACCCCAGTGT
AGTAAAAAAG ATGTATGGGT TAAGTTTCCG AACTTTCCGG CAAGCTTAGA AACTACTAAG
CTTGCTACAC CTGCTACTAA GTCGGTACTG GCAAAACTCG ATCTACTGAT CAAAAACCTT
CCAATTGACC CTAAGCGTGT GTATGTAACG GGCTACTCTA TGGGTGGCGA AGGGGCCTTT
GATTTTTTAG CCCGTCGCCC TGGTTTATTT GCCGCAGCCA TTCCTATATG TTCTGTGTCA
GACACGGCTA AGGCCAGGTT GATTTATAAA ATACCGATAT GGGCTTTTCA TGGCGATCAG
GATGATGTAA ACGATGTGAA ATATTCCAGA TTGATGATTA CAGCTCTTGA AAACCGTAAA
GGAACGCCGA AGTACACGGA ATATCAGGGC GTTAAACACA ACAGCTGGCT TAAAGCTTAT
GAGGAGCCTG GTTTGTTTGA CTGGCTTTTC TCTCAAAGAA GGCGATAA
 
Protein sequence
MVVDKLKLVI AFILACQSVK AQQISTYTKD VYVTSKDSLP YRLLYPLNYN KNKKYPIVVF 
LHGSGQRGNN NEAQLTGVPK RLTDSAGRVK YACFILAPQC SKKDVWVKFP NFPASLETTK
LATPATKSVL AKLDLLIKNL PIDPKRVYVT GYSMGGEGAF DFLARRPGLF AAAIPICSVS
DTAKARLIYK IPIWAFHGDQ DDVNDVKYSR LMITALENRK GTPKYTEYQG VKHNSWLKAY
EEPGLFDWLF SQRRR