Gene Phep_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0081 
Symbol 
ID8251165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp89134 
End bp90588 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content40% 
IMG OID644933730 
Producthypothetical protein 
Protein accessionYP_003090369 
Protein GI255529997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.898095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA GAAATAAAAT TTTTGCCAGT TCTTTGTTGT TGCTTGTCGC AATTGCAGGG 
ATGTCGTGCA AAAAGTATCT GGATATAAAT AAAAACCCAT TGTCTGCCGA AAAGGTAGAA
GCTAAATTGC TGTTTGGCTA TGCTGTAACG GCCTGGGATG TAAGTAAAAA TAGTGGTGAT
AATTACATTG CACTTGGATT TCTTGGGCAA ACATTATCCT CTGGTGGTGA CTTCTCTGAA
AACTGGGGTT CGTCCAATTT ATACAACATC AGTACCAATA TCATCGGTAA TGGCTGGAAA
GTATATTACA GTACAGCCGG TTTTAACTTG AAACAAGCTA TTAAAGCTGC CGAGTCTGCT
AAACCTGTAA ATAACAATGG GGCTGCACAA TGTAAAATTA TACTGGCCCA GCTATTGTTT
GAGGGAACGA CTTTATTTGG TGATGTTCCC TATTCACAGG CTTTTGATAT AAATCAGTTT
CCTTATCCTA AATATGATGC CCAGAAGGAT GTCTTGGAAT CTTTATTGAA ACTGCTTGAT
GAAGCTAACG CGCAAATTGA TGTGGCAAAC ACAACCAAGA TAGCTGATTA TGACATTTTT
TATGGTGGTG TAATGGCAAA CTGGAAAAAA CTCGCCAATT CCATCAAATT TAAAATTTTG
ATGACAATGG TCGATAAAGA TCCTAGTAAA GCTGCAGCCA TTGGTGCACT TGTTCAGGCG
CCGGCAACTA TGATTGCTTC ACCTGCTGAT AATTTTAGGG TTTTGTATTC AGGAAATACA
AACAATGAGA ATCCTAAATT CAGGTTATTT GGCGGTCAGA ATCCTTTTAC TTATGCAAAT
AAGACTGTTA CAGACTGGAT GGTTCGAAAA AATGATCCAA GATTGCCAAA ATATTTTGAT
AGGCCAGCAG GGGAAACTAA CTATATTGGT GTTCCAGCCA ATGTGGATGC GGATGAGCAC
ACTTCTTTGA TCAGTACTTA TTTGTACAGG AAAACTGCAC CTTCGCTTAT ATTCTCTTTT
CAGGAAATGC TGTTTTTGCA GGCAGAAGTT TATGCCAGGG GAATTGGTGT TCCAAAAAAT
TTGACTACTG CGAATACTTT ATATAAGAAC GCACTTCAAG CTGCGTTTAC TTTTTACGAA
GCCGATCCAG CTAAGGTTTC TGCCTATATG ACACCTGGAG GTGGCTTGGT TGATTTAACC
ACCGCTGCAG ATCCGGTAAA AGAAATTCAT ATGGAACAAT GGATTGATAT GATGGACAGG
CCATTGGAGG CATTTTTACA ATGGAGAAGA TCTGGACCGG ACGGAAGTGA AGTGCCATTG
CTGACCGTGC CTTTTGGCGC AACAGCTGGA CCTCTTTTCA GAAGACTTCC TTTGTCTGAT
GATGAGATCC GCGCAAATCC TAACATCCCG AACCCACAAC CAAAGTATAC GGATAAAGTT
TGGTTTGATC TATAA
 
Protein sequence
MKIRNKIFAS SLLLLVAIAG MSCKKYLDIN KNPLSAEKVE AKLLFGYAVT AWDVSKNSGD 
NYIALGFLGQ TLSSGGDFSE NWGSSNLYNI STNIIGNGWK VYYSTAGFNL KQAIKAAESA
KPVNNNGAAQ CKIILAQLLF EGTTLFGDVP YSQAFDINQF PYPKYDAQKD VLESLLKLLD
EANAQIDVAN TTKIADYDIF YGGVMANWKK LANSIKFKIL MTMVDKDPSK AAAIGALVQA
PATMIASPAD NFRVLYSGNT NNENPKFRLF GGQNPFTYAN KTVTDWMVRK NDPRLPKYFD
RPAGETNYIG VPANVDADEH TSLISTYLYR KTAPSLIFSF QEMLFLQAEV YARGIGVPKN
LTTANTLYKN ALQAAFTFYE ADPAKVSAYM TPGGGLVDLT TAADPVKEIH MEQWIDMMDR
PLEAFLQWRR SGPDGSEVPL LTVPFGATAG PLFRRLPLSD DEIRANPNIP NPQPKYTDKV
WFDL