| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0060 |
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| Symbol | |
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| ID | 8251144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 66369 |
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| End bp | 66971 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644933709 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003090348 |
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| Protein GI | 255529976 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTTC CTTTTACAGA TGATTCAGTA ACCTGGCAGC TATTTAAAAA TGGCGATAAA
AAGGCATTTT CTTTCATTTA CACCACTTAT AGCCCTAATT TGTATGAATA TGGGATGAGG
ATACTGCAGG ATGAAGAACT GACCAGGGAC GCCATCCATG ACCTTTTTGT GAAGCTCTGG
CAAAACAGAA AATCCATTGG CACAACCAAT AACATCAAGT ATTACCTTAT CACAGCGCTT
CGCAACACTA TTTTTACATT AAAGGGCATA GAGAACAGGA TGCAGCTGAC CGGTTTAAAT
GAGGCGGATG CTTTTCATCT TGATTTTACC CTTGAGTCGG CATACATCCG GAAAGAAGAC
CTTAATCTGC TTTCCATACA ATTGCTGGAT GCGCTGAACC AGATCAGCCC CAGACAAAAG
GAAATTCTTT ACCTGAGGTA TTTTGAAGAA CTGGATTACA ACCAGATTGC TGAAATGATG
AACATCTCTG TAAAAGGAGC ATATAAATTA TCTGCACGTG CTTTGGAGGC CTTGCGTGAA
CTTATGAAAC TTCCGTTGTC ACTCCTTCTT TTCCTGTTGC TGATGGGCCG GGAACGGTTT
TAA
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| Protein sequence | MELPFTDDSV TWQLFKNGDK KAFSFIYTTY SPNLYEYGMR ILQDEELTRD AIHDLFVKLW
QNRKSIGTTN NIKYYLITAL RNTIFTLKGI ENRMQLTGLN EADAFHLDFT LESAYIRKED
LNLLSIQLLD ALNQISPRQK EILYLRYFEE LDYNQIAEMM NISVKGAYKL SARALEALRE
LMKLPLSLLL FLLLMGRERF
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