Gene Phep_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0019 
Symbol 
ID8251103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp22346 
End bp23254 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content43% 
IMG OID644933668 
ProductAbortive infection protein 
Protein accessionYP_003090307 
Protein GI255529935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.718936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCTA TAGAAGAAAT TAAAGAAGAG AACACCCCCT TTGTACAGCT GTTGATGTTG 
TGCTTTTATG CTTTTTTAGG CCTGTTTGTA TTTTTAGCTA TAGGTTTTGC AGTGATCTAT
TTGAAATATG GCGGGAGCCT GGTGCAAAAT ATGGACTGGC TGAGTAGTAC TGAAGCAAGT
TACTTGCCCG CACAGAGAAT ACTGATAACA GCCCAGCAAA TCGGTTTATT TTTAGTGCCC
GCCCTGCTGC TTGCTAAAAT TGAAGGCGGC CGAATCAATG GTTTTTATGG ATTTAAAAGA
CCTGATGCAG GGCTGTTGTT GCTGGTATTG CTGATGATGG CCGGTGCCCT GCCCTTGCTG
GAATGGGTGA CCCAGTTGAA CCAGAAAATG AGCTTTCCTG CCGCTTTAAA AGGTGTAGAA
AACTGGATGA AAGCAGCGGA GGACCAGGGT ATGAAAATGA CCATTGCCTT ATTAAAAATG
GAGAATATAG GGATGTTCCT GTTGAATATA GGAATGATTG CCCTGCTACC GGCTGTGGCC
GAAGAACTGA TGTTCAGGGC AGGCCTGCAG CGTATTTTTG GCAGAATGTT TAACAATCCA
CACCTGGCGA TCTGGTTTTC AGCTTTTGTA TTCAGTGCCA TACATATGCA GTTTTACGGG
TTTTTACCCC GATTGCTGCT GGGGGCAACA TTTGGGTATA TCTATTTCTG GAGCGGCAGC
TTATGGTATG CCATATTTGG ACATTTTTTA AATAATGCCT ATGCGGTATG CGCAGCATGG
TATATGCAAA AAAACAATAT ACCTTTGTCG GAGGCCGATA AAACGATGGA CATTGCCTGG
TATGGTTATG TGATCAGTGT CGGATTGACC TTTTTGCTGT TCCGATATTT TAAAAAACAA
ACTCAATGA
 
Protein sequence
MGSIEEIKEE NTPFVQLLML CFYAFLGLFV FLAIGFAVIY LKYGGSLVQN MDWLSSTEAS 
YLPAQRILIT AQQIGLFLVP ALLLAKIEGG RINGFYGFKR PDAGLLLLVL LMMAGALPLL
EWVTQLNQKM SFPAALKGVE NWMKAAEDQG MKMTIALLKM ENIGMFLLNI GMIALLPAVA
EELMFRAGLQ RIFGRMFNNP HLAIWFSAFV FSAIHMQFYG FLPRLLLGAT FGYIYFWSGS
LWYAIFGHFL NNAYAVCAAW YMQKNNIPLS EADKTMDIAW YGYVISVGLT FLLFRYFKKQ
TQ