Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0016 |
Symbol | |
ID | 8251100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 20158 |
End bp | 20850 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644933665 |
Product | peptidase membrane zinc metallopeptidase putative |
Protein accession | YP_003090304 |
Protein GI | 255529932 |
COG category | [R] General function prediction only |
COG ID | [COG2738] Predicted Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.998824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACTT ATTTTGTTTT GATAATCCCG ATACTGATAA TTAGCATGTT TGTGCAGTGG CGTTTTAGAA ACAGATTTTC TAAATATGCA GAGATGCAGT TAAATTCAGG GTTTTCGGGA AAAGAGGTGG CTGAGAAAAT GCTGCAGGAT AATGGGATTT TTGATGTAAA AGTGATGAGC ACAGACAAGG CCTTATCCGA TCATTACAAT CCTGAAGATA AGACAGTCAA TTTAAGTACT GACGTATATT ACGGAAGAAG CGTTGCGGCA GCTGCAGTGG CAGCACATGA ATGTGGACAT GCGGTACAAC ATGCCCGATC CTATCATTGG TTACAATTGA GATCAAATAT GGTACCTGTA GTCAGCATCA CTTCAAATTT GCTGCAATGG GTATTGATTG TTGGTGTATT GCTGATTGCT TTTACCTTTA ACCCAATCGT ATTGGGCATT GGTGTACTGG GTCTGGCCTT AATTACCATA TTCAGCATCA TTACTTTGCC GGTTGAATTT GATGCCAGCA AAAGGGCTTT ATTGTGGTTA AAAAACAATA AAAGTGTGTT GTATACTACT GAAGAACATG TTCAGGCAAA AGATGCCCTT TGGTGGGCCG CTATGACTTA TGTGGTTGCG GCAATGGGTG CCCTGGCCAA TCTGTTTTAC TATGCTTCTA TTCTTTTTGG CAGGAATAAA TAG
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Protein sequence | MGTYFVLIIP ILIISMFVQW RFRNRFSKYA EMQLNSGFSG KEVAEKMLQD NGIFDVKVMS TDKALSDHYN PEDKTVNLST DVYYGRSVAA AAVAAHECGH AVQHARSYHW LQLRSNMVPV VSITSNLLQW VLIVGVLLIA FTFNPIVLGI GVLGLALITI FSIITLPVEF DASKRALLWL KNNKSVLYTT EEHVQAKDAL WWAAMTYVVA AMGALANLFY YASILFGRNK
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