| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0009 |
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| Symbol | |
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| ID | 8251093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 10253 |
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| End bp | 12115 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933658 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_003090297 |
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| Protein GI | 255529925 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAG AATATGATGT AATTGTGGTG GGCGGAGGCC ATGCCGGTTG CGAGGCGGCA
GCGGCAGCGG CCAATCTTGG ATCATCTGTT TTATTGATTA CGATGAACAT GGAAACCATC
GCGCAGATGA GCTGTAATCC GGCCATGGGC GGCGTTGCCA AAGGTCAGAT TGTACGTGAA
ATTGACGCTA TGGGGGGTTA CTCTGGTATC ATTAGCGACA AAACAACACT CCAATTCCGT
ATGCTCAACC TTTCTAAAGG ACCTGCTATG TGGAGTCCAA GAACGCAAAA CGACAGAAAA
AGATTCGCAG AAGAATGGAG GCTTGCGCTG GAACGCACGC CGAACGTAGA TTTCTGGCAA
GATATGGTTG GTAGTTTACT GATCAAAGAC AATAGGGTTA TTGGGGTTAA AACGGCAATA
GGTGTTGAAA TAAAAGGTAA AGCCGTAGTG CTTACCAATG GCACATTTTT AAATGGGCTG
ATCCATATAG GAGAGAAAAA GTTTGGCGGC GGCAGAACAG GAGAAAAAGC TGCAACCGGA
TTGACTGAAC AACTTACAGC ATTTGGGTTT GAGGCCGGGA GAATGAAAAC CGGTACCCCA
CCCCGTGTAG ATGGACGGTC GTTAAATTAT AGTTTGATGG AAGAACAATG GGGAGATGAA
AATCCTGGTC GTTTCTCCTT TACAAATGCA GAACTTCCAA AAGAACAGCG CTGCTGCTGG
ATCACCTATA CCAATGCAAA TGTACACGAA ACTTTAAAAG AGGGATTCGA AAAATCGCCC
ATGTTTACCG GCCGGATCAA AGGTCTTGGG CCAAGGTATT GCCCTTCTAT AGAAGATAAG
ATCAACCGCT TTGCTGAACG GGAAAGACAC CAGATCTTTG TAGAGCCCGA GGGCTGGAAC
ACCTGCGAGA TTTACGTAAA TGGGTTCTCT ACTTCATTAC CTGAAGATGT ACAATACAGG
GCGCTTACCC AGATACCTGG TTTTGAAAAT GCCAAAATGT TCCGCCCGGG GTACGCCATA
GAATACGATT ATTTTCCACC TACGCAGCTG TCTTTAACGC TGGAGACCAA ATTGATCAGC
AATTTGTTCT TTGCAGGTCA GATAAATGGC ACAACTGGTT ATGAAGAGGC TGCTAGTCAG
GGTTTTATAG CCGGAATCAA TGCCCATCAG AAGGTAAGTG GCCAGCAGGA ACTCATCATG
AAGCGTTCAG AGTCGTACAT TGGTGTATTG ATCGATGACC TGGTCACTAA AGGGACGGAA
GAACCTTACA GGATGTTTAC TTCAAGAGCA GAACATCGCT TATTGCTGCG CCAGGATAAT
GCCGATATCC GCCTCTCTCC TATTGCGCAT AAACTGGGTC TGATCAGCGA TGAGCGGTTG
GATATCGTAA ACCAGAAAAT AAAAAATTCA GATACCATTG TAGCTTTTGC CAAAAAACAG
GGAATTGAAA TGAATAACGC AAACTCCATG CTAGAAGAAT TGGGAACTAC TCCATTAAAC
CAGAATGTAA AGTTATTCAG CTTACTGAGC CGGCCACAGG TTGGCATGAA TGATGTAAGA
AAAGTAAGTG AGCCGCTGGA AGGATTACTG AAACAATTTG ATAAAGAAAC CATAGAGCAG
GCAGAAATCA AAATCAAGTA TGAAAGCTAT TTTGAAAAAG AACAGGAAAT TGTGAATAAA
ATGCAGAAAA TGGAAGATAA AGATATCAAT CCCAATTTCG ATTATTCACA ATTGGTATCT
TTATCAAAAG AAGCCAGAGA GAAATTGCTT AAGATCAAAC CGAGAACATT GGGACAAGCC
TCCCGGATTT CAGGTGTTTC ACCTTCTGAT ATCTCTGTTT TAATGGTACA CATCAGTAAA
TAA
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| Protein sequence | MFKEYDVIVV GGGHAGCEAA AAAANLGSSV LLITMNMETI AQMSCNPAMG GVAKGQIVRE
IDAMGGYSGI ISDKTTLQFR MLNLSKGPAM WSPRTQNDRK RFAEEWRLAL ERTPNVDFWQ
DMVGSLLIKD NRVIGVKTAI GVEIKGKAVV LTNGTFLNGL IHIGEKKFGG GRTGEKAATG
LTEQLTAFGF EAGRMKTGTP PRVDGRSLNY SLMEEQWGDE NPGRFSFTNA ELPKEQRCCW
ITYTNANVHE TLKEGFEKSP MFTGRIKGLG PRYCPSIEDK INRFAERERH QIFVEPEGWN
TCEIYVNGFS TSLPEDVQYR ALTQIPGFEN AKMFRPGYAI EYDYFPPTQL SLTLETKLIS
NLFFAGQING TTGYEEAASQ GFIAGINAHQ KVSGQQELIM KRSESYIGVL IDDLVTKGTE
EPYRMFTSRA EHRLLLRQDN ADIRLSPIAH KLGLISDERL DIVNQKIKNS DTIVAFAKKQ
GIEMNNANSM LEELGTTPLN QNVKLFSLLS RPQVGMNDVR KVSEPLEGLL KQFDKETIEQ
AEIKIKYESY FEKEQEIVNK MQKMEDKDIN PNFDYSQLVS LSKEAREKLL KIKPRTLGQA
SRISGVSPSD ISVLMVHISK
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