| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5780 |
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| Symbol | |
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| ID | 8229396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6942498 |
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| End bp | 6943724 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933625 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003090133 |
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| Protein GI | 255039512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.649929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACA ATCTTGATAT CGCATCCATC CGCAAAGACT TCCCGATTTT GAACGAAGTC
GTGAACGGCA AACAGCTCGT CTATTTCGAT AATGCGGCAA CGACCCAGAA GCCGCGCCTG
GTGCTAGACG CGCTGTCGGG TTACTATGAG CATTACAATG CCAATATCCA CCGCGGCATT
CACCATCTGG CCGAAAAAGC GACGTCGGCA TTCGAGCAGT CGCGGAAGCG CTTGCAAGCG
TTTTTGAATG CGGAACATTC GGAGGAAATC ATTTTCACTT ACGGAACCAC CGACGGCATC
AACCTCGTAG CATCAGCTTA TGGCCGAAAA TTCCTGAAAG AAGGCGACGA AGTGATCATT
TCCACGATGG AGCACCATTC CAACATCGTG CCCTGGCAAA TGCTTTGCGA AGAGAAGGGA
TGCATTTTGA AAGTGATCCC GATCAACGAC GAAGGGGAGC TTTTGATGGA CGAATACGAG
AAGCTGCTTA CCGAACGGAC CAAATTCGTA TCCGTCGTGC ATGTTTCGAA TGCATTGGGC
ACCATTAACC CGATCAAAGA GATTATTGCC AAAGCCCACG CGGTAGGCGC GAAAGTCCTC
ATCGACGGCG CACAAGCGAG CTCACACATT GAAATCGACG TGCAGGACCT GGATTGCGAC
TTTTATTCGC TATCCCTGCA CAAAATATAC GGCCCGACCG GCATGGGTAT CCTCTACGGC
AAAAGCGATT TGCTGAATGC GATGCCTCCC TACCGCGGCG GTGGCGAGAT GATCAAAGAA
GTGACTTTCG CCAAAACGAC TTACAACGAG CTGCCATATA AATTCGAGGC CGGTACGCCT
AACATCGCCG ATGTGGTGGC TGCCAAGTTT GCACTGGATT ATGTGGATGC CCTCGGTAAA
GCTAATATCG CTGCTTACGA GCATGAACTG CTAGCATATG CAACGGAAGC CGTAAAGGAA
ATCGAAGGGT TGAGAATTAT CGGCCAGGCG AAAGAGAAAG TGAGCGTGTT ATCGTTCGTG
ATCGACGGCA TTCACCACCA GGACATCGGC GTGCTGCTCG ACCAGCAAGG CATTGCCGTT
CGTACCGGTC ACCACTGTAC ACAGCCATTG ATGAACCGCT TCGGCATCAC CGGAACCTCA
CGCGCATCGT TTGCTGTTTA CAACACAACC GAGGAAATCG ACAGGCTCAT TCAAGGCCTG
CATAAGGTGA AGCGGATGTT GGGATAA
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| Protein sequence | MSHNLDIASI RKDFPILNEV VNGKQLVYFD NAATTQKPRL VLDALSGYYE HYNANIHRGI
HHLAEKATSA FEQSRKRLQA FLNAEHSEEI IFTYGTTDGI NLVASAYGRK FLKEGDEVII
STMEHHSNIV PWQMLCEEKG CILKVIPIND EGELLMDEYE KLLTERTKFV SVVHVSNALG
TINPIKEIIA KAHAVGAKVL IDGAQASSHI EIDVQDLDCD FYSLSLHKIY GPTGMGILYG
KSDLLNAMPP YRGGGEMIKE VTFAKTTYNE LPYKFEAGTP NIADVVAAKF ALDYVDALGK
ANIAAYEHEL LAYATEAVKE IEGLRIIGQA KEKVSVLSFV IDGIHHQDIG VLLDQQGIAV
RTGHHCTQPL MNRFGITGTS RASFAVYNTT EEIDRLIQGL HKVKRMLG
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