| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5758 |
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| Symbol | |
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| ID | 8229374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6914966 |
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| End bp | 6916393 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644933603 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_003090111 |
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| Protein GI | 255039490 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.302413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAG AACGCATTTC CGTTTTCGAC ATTTTTAAGA TTGGCATCGG CCCGTCCAGT
TCGCATACAT TAGGCCCGTG GCGGGCGGCG CAGCAGTTTT TGGGGATTGT GAAGGAGCGC
GGGCTGCTCG GAAGCGTCGA AAAAGTGACA GTACATTTGT TTGGTTCGCT GGCGAAAACC
GGGCGGGGGC ATGGTACCGA TATTGCCGTG ATCCTCGGGC TGAGCGGTTA TGACCCCGTG
ACCATTGAAA CAAGCTCCAT TGATCAGATT CTGGCCGATA TTGCAGCCAG CGGATCGCTG
ATGCTGCATG GGGAGATGCA AATTCATTTC AGCCCCAAAA CAGATGTCGT TTTTCATAAA
ACCGAAACCT TGCCGTTTCA TCCGAATGGG CTGGGGTTTT CGGCCGTTTG TCTAAATGGT
GAGGTGGTGG AGGAAACCTA CTATTCCATC GGCGGCGGAT TTGTGATCCA GGAGGGTAAG
GAGGCAACGG GCAAGATGTT GTCCGCCGAT ATTCCGTATC CGGTGGATCG TGCGTCGGAT
GTGCTGGAAT GGCACCGGGT CACGGGGAAG CCGATTTGGG AAATGGTGCT CGATAATGAG
CGCGTCTGGA AAGATGATGC GGCGATCCGG AAGGATTTAC TGAACATCTG GCGTGTGATG
CAGGATAGTA TTTTCCTCGG TTGCCAGCAT AAAGGTGTGC TACCGGGAGG CCTGAATGTA
CAACGCAGGG CCGCGGAACT GAACCAGAAG CTGCTGAAAG GCCATACCTG CGCCGGGTGC
GATGAATGGG TCGAGCTGAT CAGGAATGGC GGCTCGGGTT TCAATTATAC GCTCGACTGG
GTGAGCTGCT TCGCGCTGGC CGTGAATGAG CAGAATGCCT CGTACAGCCG CGTGGTGACG
GCGCCTACCA ATGGGGCCGC GGGCGTCATT CCGGCGGTGC TGCAATTTCA TGTCACGTTT
TGCGGCGGTA CGGAAGAGGA TATTTTTCGC TTCCTGCTGA CGGCCGGGGA GATTGGCAGT
ATTTTCAAAA AAGGGGCCAC CATTTCTGCG GCAATGGGCG GTTGTCAGGC AGAAATCGGC
GTGTCGTCGG CGATGGCTGC GGCGGGCCTG GCACAGGTGT CCGGCGGGAG CGTGGAGCAA
TGCCTGATGG CCGCGGAAAT TGCCATGGAG CACCATCTTG GCCTTACCTG TGATCCGGTG
GCCGGGCTCG TGCAGATACC CTGCATCGAA CGCAACACGA TGGGCGCCAT TAAGGCGATT
ACCGCGTCGC AGCTAGCATT GCAGAGTAAT CCCGGAAATG CGAAGGTGTC GCTGGATAAT
GTGGTTAGTA CCATGTGGCA GACTGCCCTC GATATGAACA ATCGCTACAA GGAGACTTCC
GAAGCAGGCC TGGCAGTGAA TATCCCCATC AGCCTCAGCG AATGCTGA
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| Protein sequence | MTSERISVFD IFKIGIGPSS SHTLGPWRAA QQFLGIVKER GLLGSVEKVT VHLFGSLAKT
GRGHGTDIAV ILGLSGYDPV TIETSSIDQI LADIAASGSL MLHGEMQIHF SPKTDVVFHK
TETLPFHPNG LGFSAVCLNG EVVEETYYSI GGGFVIQEGK EATGKMLSAD IPYPVDRASD
VLEWHRVTGK PIWEMVLDNE RVWKDDAAIR KDLLNIWRVM QDSIFLGCQH KGVLPGGLNV
QRRAAELNQK LLKGHTCAGC DEWVELIRNG GSGFNYTLDW VSCFALAVNE QNASYSRVVT
APTNGAAGVI PAVLQFHVTF CGGTEEDIFR FLLTAGEIGS IFKKGATISA AMGGCQAEIG
VSSAMAAAGL AQVSGGSVEQ CLMAAEIAME HHLGLTCDPV AGLVQIPCIE RNTMGAIKAI
TASQLALQSN PGNAKVSLDN VVSTMWQTAL DMNNRYKETS EAGLAVNIPI SLSEC
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