| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5694 |
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| Symbol | |
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| ID | 8229310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6840887 |
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| End bp | 6841789 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933540 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003090048 |
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| Protein GI | 255039427 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.986609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTCG AAAACATTCA ACTGGGCGTT GCTCCTATTA ACTGGACCAA CGACGATATG
CCGGAGCTCG GCGGCGAGAA TACTTTTGAG CAATGCGTGA GCGAAATGGC GCTGGCGGGC
TTCACAGGCT GTGAAGTAGG CAACAAGTTC CCCCGCGATG TGAATGTGCT GAAAAAAGCA
TTGGAACTCC GCGGATTGCA GATCTGCAAC CAGTGGAACA GCTACGAGCT CACGACCAAA
TCGTTCACCG AGAACCGCGA GAATTTCACC AAACTGCTCG ATTTCCTTGA AGTCATGGGC
GCGCGCGTGA TTGGCGGCGG CGAGACGGGC AACAGCTGCC AGGGACAAAT GAATGTGCCG
GTGTTCGAAG GCAAAGGGAT GCTGAGCACC CGCGAAGAAT GGGCCAGCTT CACCTACGGC
CTGGACGAGC TCGGCAAGAT TGCCCGCGAC CGCGGCATGA AGCTCGCGTT TCACCATCAC
ATGGGCACGT GCGTTCAAAC CATGGAAGAA ACCGACCGGC TGCTCAACGA AACCAATCCC
GATTATGTGT TCCTCAACTA CGACTGTGGG CATTTCCATT TCGCAGGCGA GGACCCGGTG
GCGGCATTGA AAAAATACAT CGGCCGCACG GCGCACATCC ATTTGAAAGA CGTCCGCCCG
ACCATCCTTC AACGCGTGCA CGACGAACGG CTGAGCTTTC TCACGGCTGT CAAAAATGGC
GTGTTCACCG TTCCAGGTGA CCCGGAAGGG TGCATCGACT TCCCCTCGCT GTTTGCGATC
ATCAGGGAAA GCGACTACGC CGGCTGGATC GTCCTCGAAG CCGAACAGGA CCCCGCCAAA
GCAAACCCGC TCGAATACGC GATCATCGCC CGCAATTTTT TCAGAAGTTT AACAGGCATT
TAA
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| Protein sequence | MNFENIQLGV APINWTNDDM PELGGENTFE QCVSEMALAG FTGCEVGNKF PRDVNVLKKA
LELRGLQICN QWNSYELTTK SFTENRENFT KLLDFLEVMG ARVIGGGETG NSCQGQMNVP
VFEGKGMLST REEWASFTYG LDELGKIARD RGMKLAFHHH MGTCVQTMEE TDRLLNETNP
DYVFLNYDCG HFHFAGEDPV AALKKYIGRT AHIHLKDVRP TILQRVHDER LSFLTAVKNG
VFTVPGDPEG CIDFPSLFAI IRESDYAGWI VLEAEQDPAK ANPLEYAIIA RNFFRSLTGI
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