| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5644 |
|---|
| Symbol | |
|---|
| ID | 8229260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6781596 |
|---|
| End bp | 6782849 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644933491 |
|---|
| Product | L-fucose transporter |
|---|
| Protein accession | YP_003089999 |
|---|
| Protein GI | 255039378 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease
[TIGR01272] glucose/galactose transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.183274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.735779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC GTAAGACGCG GCTGGCTGTC ATCCTCATCA CTTCACTGTT CTTTCTCTGG
GGTTTTGCCC TCAATCTCAA CCCCATCCTG ATTCCGCATT TAAAAAAAGC CTGTCAGCTC
AGCGACTTCC AGTCGGCCCT GATCGACTCC GCTTCCTACA TTGCCTACTT CCTCATCGCA
TTGCCCGCCG GCCTTTTTAT GAAGAAGTAT GGATATAAGG CTGGTATCGC CTTTGGATTA
TTGCTTTTTG CCACTGGCTC ATTTCTTTTT TACCCGGCGG CTGAAATGCG GCACTTCGGC
TTCTTCCTGT TCGCATTGTT TGTGATTGCC AGCGGGCTCA CCATGCTCGA AACCGCCGCA
AATCCCTACA TTACCGTCCT GGGCGACCCG GATTCGGCCA CGCAACGGCT CAACTTTGCA
CAGTCGTTCA ACGGCCTGGC GGCATTTCTG GCGCCGTTGA TGGGCGGAAA ATTCATTCTT
TCCGGTAAAA CACTCACCGA CGCTGAGCAG CAGGCTATGT CGTCCGACCA GCTCAATGCT
TACCTGAACG AAGAAGCATC GTCGGTGCAG GTTCCTTTCA TTCTCATTGG ATTGGTGGTA
TTGCTCGTAG CCGTGCTGAT CTGGCGGACA TCGCTTCCGG AAATCAAGGA CGAGGAAGAA
ACGGAACAAA AACCGACCGG CTCCATCTGG GGTGAAAAGA ACCTCATCCT CGGCACCATA
GCACAGTTCT TTTACGTGGG CGCGCAGGTT TGCATCAGCA GCTTTTTTAT CCGTTTCGCT
GATCATGTGG CTGGCATTGA TGAAAAAACG GCTGCATACC TGCTTTCGGG AGCATTGCTT
GCATTTATGA TCGGCCGGTT TATCGGCACA TATCTGATGC GCTTCGTGGC ACCTCCCAGG
CTGCTCGCCA TTTATAGCGT TGCGAACATC GTGCTCCTGA TTATAGCCGT ATTGACCGAC
GGTATGTTCT CGGTTTACGC ATTGGTAGGC GTGGAATTCT TCATGTCGAT CATGTTCCCG
ACGATTTTTG CATTGAGCAT TCGCGGCTTG GGCGAGAAGA CCAAAATCGG TTCTTCACTG
GTAATCATGT CGATCGTCGG CGGTGCATTT TTCCCTGTCA TTATGGGTCA GGTATCAGAT
ATTTCGTCCA TTCAAACGGC TTACATAGTC CCTGCGGTGT GTTTCCTCGT AGTACTATAC
TTCGCGATCC GCAACGGCTC AGTAAAGAAC GTGACGCTGG GCACTTCACA TTAA
|
|---|
| Protein sequence | MTDRKTRLAV ILITSLFFLW GFALNLNPIL IPHLKKACQL SDFQSALIDS ASYIAYFLIA
LPAGLFMKKY GYKAGIAFGL LLFATGSFLF YPAAEMRHFG FFLFALFVIA SGLTMLETAA
NPYITVLGDP DSATQRLNFA QSFNGLAAFL APLMGGKFIL SGKTLTDAEQ QAMSSDQLNA
YLNEEASSVQ VPFILIGLVV LLVAVLIWRT SLPEIKDEEE TEQKPTGSIW GEKNLILGTI
AQFFYVGAQV CISSFFIRFA DHVAGIDEKT AAYLLSGALL AFMIGRFIGT YLMRFVAPPR
LLAIYSVANI VLLIIAVLTD GMFSVYALVG VEFFMSIMFP TIFALSIRGL GEKTKIGSSL
VIMSIVGGAF FPVIMGQVSD ISSIQTAYIV PAVCFLVVLY FAIRNGSVKN VTLGTSH
|
|---|
| |