Gene Dfer_5640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5640 
Symbol 
ID8229256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6777461 
End bp6778567 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID644933487 
ProductABC-2 type transporter 
Protein accessionYP_003089995 
Protein GI255039374 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.332161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT TTCTCGCATT CGTCAGAAAA GAATTTTACC ACGTGCTGCG CGATCGCCGC 
ACGTTACTGA TTTTGTTTGG AATGCCCATT GCACAGATAT TGATCTTCGG CTTCGCATTG
ACCAACGAGG TAAAGGATTC GGAAATCCTC GTCGTGGATT ATGCCAGGGA CGATGCCTCG
CAGGCATTGC TGACAAGGAT CGGCGCGAGC CGGTATTTCG ATATCCGGCA GGCTGCATTA
AGCCATAAGG AGATACTAGG CACCTTTCAG AAGGGCAAGA TCAAGGCGGT GGTGGTGTTC
CCGGCCAATT TTAATGCGGA TTTGCTGCAT ACCAATAAGG CTCAGGTTCA GATCGTTACC
GATGCCAGCG ATGTGAATAC GGCCAACATG ATCACCAATT ACCTGTCGTC TATCATCCTC
GATTACCAGA ACCAGCTCAA TGAAAACCTG CAAATGCCCT ACCGGATCAC GCCGGAGGTG
CGGATGCTCT ATAACCCGCA GCTGAAAGGC GCGCACGGTT TTGTGCCGGG CGTAATGGCG
CTGGTGCTGC TGCTGGTTTC GGTGATGATG ACCGCCATTT CGATCGTCCG CGAAAAGGAG
ACGGGTACGA TGGAAATCCT GCTTGTTTCG CCGTTCAAGC CGGTTTTGGT CATTTTTGCC
AAGGCATTTC CGTACCTCGC ATTATCGCTC GTGAATGTGA CGGCGATCCT GCTGCTCAGC
GTTTTTGTGC TCGATTTGCC GGTGAAAGGG AGTGTAGGGC TGCTGTTCGC CGAAAGCACG
CTGTTTATCA TCACCTGCCT GGCGCTGGGT ATTTTTATTT CTATCAAAAC TGATTCCCAG
CAGATTGCGA TGCTTATTTC GCTGATGGGC ATGCTGCTGC CAACGATGAT GTTCAGCGGT
TTCCTGTTTC CGATCGAGAA TGTGCCGGTG CCGTTGCAGA TCATTTCCAA TATCGTCCCG
TCCAAATGGT TTTACATCAT CGTTAAGTCG ATCATGATCA AAGGTTTAGG CCTTTCGGCA
CTTTGGAAAG AGACGCTGAT ATTGTTGGGT ATGACCGTGT TTCTGCTGCT GGTGAGTTTG
AAGAGTTTTA AAATCCGTTT GCAATGA
 
Protein sequence
MKQFLAFVRK EFYHVLRDRR TLLILFGMPI AQILIFGFAL TNEVKDSEIL VVDYARDDAS 
QALLTRIGAS RYFDIRQAAL SHKEILGTFQ KGKIKAVVVF PANFNADLLH TNKAQVQIVT
DASDVNTANM ITNYLSSIIL DYQNQLNENL QMPYRITPEV RMLYNPQLKG AHGFVPGVMA
LVLLLVSVMM TAISIVREKE TGTMEILLVS PFKPVLVIFA KAFPYLALSL VNVTAILLLS
VFVLDLPVKG SVGLLFAEST LFIITCLALG IFISIKTDSQ QIAMLISLMG MLLPTMMFSG
FLFPIENVPV PLQIISNIVP SKWFYIIVKS IMIKGLGLSA LWKETLILLG MTVFLLLVSL
KSFKIRLQ