| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5611 |
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| Symbol | |
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| ID | 8229227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6746949 |
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| End bp | 6747611 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933458 |
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| Product | ABC transporter related |
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| Protein accession | YP_003089966 |
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| Protein GI | 255039345 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.650337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAAT TACAAAACGT AGAAAAAGTT TACCGCACGA GCTCTATCGA GACGCTCGCT
TTGAACAATA TCAACCTGGA TGTTAAAAAA GGCGAATTCG TTTCGATCAT GGGGCCGTCG
GGTTGTGGGA AGAGCACATT GCTCAACATC ATCGGGTTGC TGGACGCGCC ATCGAAGGGC
CAGATCGAGA TCGACGGCAC GCCGGTGGAG CGCTACACCG ACAAACACCT GGCCGAATTG
CGCAACCGGA AGCTGGGTTT TATTTTTCAG AGTTTTCACC TGATCAATGA TCTATCAGTG
GTAGATAACG TCGAAATTCC GCTGCTTTAC AGGAATACAT CCGCGAAGCA GCGCCGAGAG
CTCGCTCGGA ATGCGCTGGA AAAAGTCGGA TTGAGCAATC GCATGAAGCA TTTTCCCAAG
CAGCTTTCGG GCGGACAGAA ACAGCGCGTA GCCATTGCCC GGGCAATCGT CGGCAATCCC
GAAATCATCC TCGCCGACGA GCCTACCGGC AACCTCGACA GCGCCATGGG CAACGAGATC
CTCGGCATTC TGCAAAAGCT GAATAGCGAC GGCGCGACGA TCGTAATGGT AACCCACGAC
GAAGCCATGG CCAAAAAAAC CGACCGGCTC ATCAGGCTGT TCGACGGAAC GCAGGTTAGT
TAA
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| Protein sequence | MIKLQNVEKV YRTSSIETLA LNNINLDVKK GEFVSIMGPS GCGKSTLLNI IGLLDAPSKG
QIEIDGTPVE RYTDKHLAEL RNRKLGFIFQ SFHLINDLSV VDNVEIPLLY RNTSAKQRRE
LARNALEKVG LSNRMKHFPK QLSGGQKQRV AIARAIVGNP EIILADEPTG NLDSAMGNEI
LGILQKLNSD GATIVMVTHD EAMAKKTDRL IRLFDGTQVS
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