Gene Dfer_5592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5592 
Symbol 
ID8229207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6717573 
End bp6718574 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content55% 
IMG OID644933438 
Productglycosyl transferase group 1 
Protein accessionYP_003089947 
Protein GI255039326 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.569837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGA CGAGCGCCAC AGATTCGCGG CTGAAAATCT TCACATGGCA TGTTCATGGA 
AGCTATTTGT ACTACCTCTC ACAAGGTAAT TACGACATCT ATATTCCCGT GGCTGACACC
CGGACGGAAG GCTACTTCGG GCGGGGAGAG ACGTTCCCGT TCGGCCCGAA CGTGATCGAA
GTCCCGGTTG CGGAAGTGCG GCATATGGAG TTCGACTGTA TCCTGTTCCA GTCTGAGCGC
AACTTCCTGA TCGACCAGCA CGACATCCTT TCTGAATCGC AAAAGCGTTT GCCGCGGGTT
TACGTGGAGC ACAATACGCC CGAAGGGCAT CCGACCAACA CCCGCCATAT CATGACCGAC
CCGGAGGTGA CGCTGGTGCA CGTGACGCAT TTCAACAAAC TGATGTGGGA TAGCGGCGGC
ATTCGCAACG TGCGGGTGAT CGAACACGGC GTATGCATTC CCGAGGTAAC CTGGAAGGGT
GATATTCCAA AGGGCATTGT GGTGATTAAC CACATCCAGC AGCGCGGGCG CATTACGGGC
TGGGACGTTT TTGAGGAAGT GCGGAAGCAC GTTCCCATTG ACCTCATCGG CATGGGTACC
GCCGAATCCG GCGGGCTGGG AGAAGTGCTC AACCCGCAGC TGCCGGAATT TATCAGCCAT
TACCGCTTCT TTTTCAACCC GATCCGCTAC ACGAGTTTCG GACTGGCCGT GTGCGAAGCC
ATGATGACCG GCATGCCGAT CGTGGCGATG GCGACCACCG AGTATGTGAC GGTGATCAAA
AACGGAGAGG CGGGATTCAT CGATACCAAT CTCGACAAAC TCATTGAGGG CATGCGGCAA
CTGATCGACG CGCCGCAGCT GGCACGGACC ATGGGCGAGC AAGCCCGGAA CATCGCGCTC
GACCGCTTCG ACATCGCCCG GTTCACTTCC GATTGGGAGA AAATATTTAC AGAAACCATT
CAACTTCATC AGCATGAAAC GGAAAATAGC ATTTATCAGT GA
 
Protein sequence
MNGTSATDSR LKIFTWHVHG SYLYYLSQGN YDIYIPVADT RTEGYFGRGE TFPFGPNVIE 
VPVAEVRHME FDCILFQSER NFLIDQHDIL SESQKRLPRV YVEHNTPEGH PTNTRHIMTD
PEVTLVHVTH FNKLMWDSGG IRNVRVIEHG VCIPEVTWKG DIPKGIVVIN HIQQRGRITG
WDVFEEVRKH VPIDLIGMGT AESGGLGEVL NPQLPEFISH YRFFFNPIRY TSFGLAVCEA
MMTGMPIVAM ATTEYVTVIK NGEAGFIDTN LDKLIEGMRQ LIDAPQLART MGEQARNIAL
DRFDIARFTS DWEKIFTETI QLHQHETENS IYQ