Gene Dfer_5558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5558 
Symbol 
ID8229173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6685773 
End bp6686273 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content52% 
IMG OID644933404 
Productmethylated-DNA/protein- cysteinemethyltransferase 
Protein accessionYP_003089913 
Protein GI255039292 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.813603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.791288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACA TTTTTAAGCA AATGGCTTCG CCTACCGGCA CCCTTACCCT CATTGCCAGT 
GAAAAGGGTT TGCGGGCGGT ATTATGGAAC CATAATCCCG AAAAATCGGG CATCGACCGG
GGCGTTGAGG ATCTTGCGCA CCCATTATTG CTCGAAACCG AAAAGCAGCT GAACGAATAT
TTCAGCAAAA AACGCAAAAC ATTTACCCTT CACCTGGATT TCGTAGGAAG CGATTTTCAG
ATACAGGTGT GGGAGGCAAT GCTCACCATT CCTTTTGGCG AAACAAGGAC CTACGGCGAC
ATTGCGCGGC AAATTGGCAA TCCCGACTCA GTGCGGGCCG TAGGAGGCGC TGCCAACAAA
AACCCCATCC CGATCATCGC GCCGTGCCAC CGCGTGGTGG GTGCCAATGG CAAGCTGGTT
GGTTTTGGCG GCGGGCTTGA AAACAAGGCG ATACTGCTCG CATTGGAAGC GCCATACAGG
CAAACATCCA TTTTTGATTG A
 
Protein sequence
MGNIFKQMAS PTGTLTLIAS EKGLRAVLWN HNPEKSGIDR GVEDLAHPLL LETEKQLNEY 
FSKKRKTFTL HLDFVGSDFQ IQVWEAMLTI PFGETRTYGD IARQIGNPDS VRAVGGAANK
NPIPIIAPCH RVVGANGKLV GFGGGLENKA ILLALEAPYR QTSIFD