| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5536 |
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| Symbol | |
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| ID | 8229151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6663244 |
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| End bp | 6666393 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933383 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003089892 |
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| Protein GI | 255039271 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.739907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.787775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA AATTCATTGA AAACCCCGTC CTATCGACGG TCATATCGAT CATGATCGTC
ATTCTGGGCC TGTTGGGACT GTTTTCGCTG CCCATATCGC AGTACCCCGA CATTGCGCCT
CCCGCTGTGG AGGTAAACAC CACCTACCAG GGCGCCAGCG CGGCGGTAGT GATGAAAACG
GTAATCACGC CATTGGAAGA AGAACTGAAC GGTGTGGAGA ACATGACCTA CATGACCTCC
AAAGCCAGCA ACGACGGCAG CGCCACCATC ACTATTAACT TCAAACAGGG CACCGACCCT
GATATGGCGG CGATCAATGT GCAGAACCGC ATTACAAAGG CTACCAGCCT GCTGCCCGCA
GAAGTAATAA AGGTCGGGAT CACGACCAGC AAAAGGCTCA ACAGCGAAGT ATTCAGCTTC
CTGCTATACA GCGAGGACGG GAAATACGAC CAGAAATTCC TCGACAATTA CCTAAAAATC
AATGTAATGC CGCAGATCAA ACGGATTTCC GGCATCGGCT CGGCACAGGT GTATGGCAGC
ATGGATTACA GTATGCGGAT CTGGCTCAAA CCGGATGTAA TGGCCATTTA CGGCCTTGTG
CCCCAGGACA TTATCCGCGC ACTTGCCGAG CAAAACATCG AAGCCGCTCC GGGTAAAGTG
GGTGAAAACA GCAACCAGGT TTTTCAATAC ACCCTCAAAT ACACCGGACG ACTGGAAAAG
CCCGAGCAAT TTGAAAACAT CATTCTCCGA TCCACCGGTA ACGGGCAGCT GCTGACCCTG
AAAGACGTTG CCAGCCTCGA AATGGGCTCC TACACCTACG CGAGCACCAT CACCGCGCAG
GGCCGGCAGG CACCTTATGT GGCCATTACC CAAATGGCCG GTTCCAATGC GCACGAGATC
ATCAAAGAAT GCGAGCGGAT ACTCGGCGAG GCTTCCAAAT CATTCCCGCA GGGCGTGCGG
TACAGCGTTT TTTCGAATGC GAATGAATTC CTGGACGCAT CCATTTCCAA ACTGATCTGG
ACATTGGTGG AAGCATTCGC ACTGGTGTTC ATCGTCGTTT TCCTCTTTTT GCAGGATTTC
CGTTCAACGC TCATTCCCGC TATCGCAGTG CCGGTAGCCA TTATCGGCAC GTTTTTCTTC
CTGAAAATAC TCGGATTTAC GATCAACCTG CTCACGCTCT TTGCGTTGGT ACTGGCGATC
GGGATCGTGG TGGACGATGC CATCGTGGTG GTGGAGGCCG TCCACGCGAA GCTCGATCAC
GGTTACCGCT CGGCCAAAAA GGCGACGATC GATGCCATGA GCGAAATCAG CACGGCCATT
GTTTCCATTA CCCTCATCAT GGCGGCGGTG TTCGTCCCGG TGACGTTCGT AACGGGTTCG
GTGGGAATAT TTTACAAACA ATTCGGGTTA ACGCTCGCCG TGGCGATTGT TATTTCGGCC
ATTAATGCAC TCACGCTGAG CCCGGCGTTG TGCGCCATTC TGCTGAAACC GCATAGCGGC
GCACATCAGG CGGGCAACGG TTTTCTGCAA CGTTTCTACC GGGGTTTCAA TGCCTCGTTC
GAAGCCATGA CGGGGCGTTA CAAGCGATCG GTGCGCTGGC TGATCCACAA AAAATGGATC
GCTGTGGGCG GTATCGCGGC ATTCAGTGCA TTGCTGTGGT TTTTGGTGAG CACTACGCCT
ACCGGGTTTG TCCCCAACGA AGACAGCGGC TCGATCTACG GAAATGTCAT TCTCGCGCCG
GCTACTTCAC TGGAACGGAC GGAAATCATC GCCAACCAGA TCGACAGCAT TGCCCGCACC
ATCCCGGAGA TAGAGCTCGT ATCGCGGCTT GCGGGAATGG ACCTGATGAG CGGGGTCGGC
AGCTCCTACG CCGCCATTTT CATCCGCCTC AAACCATGGA GCCAGCGGAC GGAAAAAGGA
CAGGATATTA AGAGCATAGT CGGTACATTG TTTGCCAAAA CAGCCGGCAT CCGCGATGCC
AATATTATTT TCTTCGCCGC GCCTACCTTG CAGGGCTTCG GGAACAACGA CGGTTTTGAA
TTTCAGTTGC AGGACAAAAC CGGCGGCAGT TACCAGGCAT TCGACCAGGT GATCGGCAAA
TTCATGGGCG AGCTCAACCA GCGTCCCGAG GTCATGTACG CCGCCACGTC CTACAACACC
AACTTCCCGC AGTACGAAGT GCAGGTGAAT GTAGCCAAAT GCATGGAGGC CGGAATACCT
GTCAATGCAG TATTGAGCAC GCTGCAAGGC TATTTCGGCG GGATTTACGC TTCGGATTTC
AACCGGTTTG GCAAGCAGTA CAAGGTTATG ATCCAGGCCG AGGCTGGGCA GCGGTCGGGA
ACCGACGCGA TCAACCAGAT TTTCGTGCGC AATGACCAGG GCATCATGGC ACCCATTTCA
GAGTTTGTGA CTTTGAAGAA GGTATACGGA CCCGAGTTTA TCAACCGATT CAACCTGTTT
ACGGCCGCGG CGGTGAATGG CGCTCCCAAG CCGGGTTACA GTTCCGGCGA CGCGATCCGG
GCCATCCGCG AGGTAGCCGC AAAAACGCTG CCGCAGGGAT ATGCCTATGA ATTTTCGGGA
TTGAGCCTGG AAGAGATTTC AAGCGGTAAC CAAACGCTCC TCATTTTCCT GCTCAGCCTG
GTGTTCATCT ATTTCCTGCT CAGCGCTCAG TACAAAAGCT ACATTCTGCC ATTTTCGGTG
CTGCTCTCGC TGCCCGTCGG ACTGGCCGGC GCCTTCCTTT TTGCACGGAT TTTCGGGCTC
GACAATAATA TATTCCTGCA AATCAGCCTC ATTATGCTCA TCGGCCTGCT GGCCAAAAAT
GCGATCCTGA TCGTCGAATT CGCATTAATG CACCGCCTGA ACGGTGAAAG TATCGTGCGC
TCGGCGGTAA CGGGGGCCGT CACCCGGCTC AGACCGATCC TGATGACATC GTTCGCATTC
ATTTTCGGAC TGTTACCGCT GATGCTCGCC ACGGGTGCGG GCGCATTGAG CAACCGGTCC
ATCGGTACGG CGGCGGTTGG CGGGATGCTC GTCGGGACAC TCTTCGGCGT GTTTGTAATC
CCCGTCCTTT TCGTGCTCTT CCAAACATTG CATGAAAGAA TAAGCGGCAC CGTCGGAAAA
CCGGCCGAAG AAGAACAACT TATCTATTAA
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| Protein sequence | MLNKFIENPV LSTVISIMIV ILGLLGLFSL PISQYPDIAP PAVEVNTTYQ GASAAVVMKT
VITPLEEELN GVENMTYMTS KASNDGSATI TINFKQGTDP DMAAINVQNR ITKATSLLPA
EVIKVGITTS KRLNSEVFSF LLYSEDGKYD QKFLDNYLKI NVMPQIKRIS GIGSAQVYGS
MDYSMRIWLK PDVMAIYGLV PQDIIRALAE QNIEAAPGKV GENSNQVFQY TLKYTGRLEK
PEQFENIILR STGNGQLLTL KDVASLEMGS YTYASTITAQ GRQAPYVAIT QMAGSNAHEI
IKECERILGE ASKSFPQGVR YSVFSNANEF LDASISKLIW TLVEAFALVF IVVFLFLQDF
RSTLIPAIAV PVAIIGTFFF LKILGFTINL LTLFALVLAI GIVVDDAIVV VEAVHAKLDH
GYRSAKKATI DAMSEISTAI VSITLIMAAV FVPVTFVTGS VGIFYKQFGL TLAVAIVISA
INALTLSPAL CAILLKPHSG AHQAGNGFLQ RFYRGFNASF EAMTGRYKRS VRWLIHKKWI
AVGGIAAFSA LLWFLVSTTP TGFVPNEDSG SIYGNVILAP ATSLERTEII ANQIDSIART
IPEIELVSRL AGMDLMSGVG SSYAAIFIRL KPWSQRTEKG QDIKSIVGTL FAKTAGIRDA
NIIFFAAPTL QGFGNNDGFE FQLQDKTGGS YQAFDQVIGK FMGELNQRPE VMYAATSYNT
NFPQYEVQVN VAKCMEAGIP VNAVLSTLQG YFGGIYASDF NRFGKQYKVM IQAEAGQRSG
TDAINQIFVR NDQGIMAPIS EFVTLKKVYG PEFINRFNLF TAAAVNGAPK PGYSSGDAIR
AIREVAAKTL PQGYAYEFSG LSLEEISSGN QTLLIFLLSL VFIYFLLSAQ YKSYILPFSV
LLSLPVGLAG AFLFARIFGL DNNIFLQISL IMLIGLLAKN AILIVEFALM HRLNGESIVR
SAVTGAVTRL RPILMTSFAF IFGLLPLMLA TGAGALSNRS IGTAAVGGML VGTLFGVFVI
PVLFVLFQTL HERISGTVGK PAEEEQLIY
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