Gene Dfer_5449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5449 
Symbol 
ID8229060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6574491 
End bp6575246 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content57% 
IMG OID644933292 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003089805 
Protein GI255039184 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.349092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG TAATCATTGG CGGTACAGGG CTGATCGGGT CAAATGTGGC GAAAAAACTG 
CGTCAGCAAG GTCACACGGT CATTGCGGGC TCGCCCTCTA CGGGTATAAA CGCCCTCACC
GGCGAGGGGC TTTCCGATGC GCTGGAAAAC ACAGACGTCG TGATCGACCT TTCCAATTCG
CCGTCGTTCG AAGAGGAGCC GGTGATCCGG TTTTTTGAAA CGGTAGGCCG GAATATCCTT
GCTGCCGAAA TCCTCGCGGG CGTGAAGCAC CACCTCATCC TTTCCATTGT GGGCACGCAT
TTGCTTGGCA ACATGGGCTA CATGCGGGCG AAAATGATTC AGGAGGATTT GGTTAAAAAA
TCCGGTCTGC CGTATACGAT CATCCGTTGC ACACAGTTCC AGGAATTTGT GCCGGCCATT
GCCGCAGGTT CCACCCAGGG CAGCGAAGTG CTTATTTCCG GTACGGATTT CCAGCCGATC
GCCGCCGAGG ACGTGGCGCA GTTTGTGTCG CGTTTCGCGG TTGCCGAGCC TGCCGGGGGC
ATTGTCGAAA TTGCCGGCCC CGACCGTGCA CCTATGAGCC AGTTTGTCAA AGCATATATC
GAGGCAACGG GCGACCCCAG AACGCTTGTA GCCAATGACA GAAGCGAATA TTTCGGCGCT
ACCGTGCCGC AATCGGCCCT GGTGCCGGAA GGCAAGGCCC TGCTGGGCGA AATCCCCTTT
GCCCAGTACC TGCAATCGCT GACAGCGAAG GTGTGA
 
Protein sequence
MKIVIIGGTG LIGSNVAKKL RQQGHTVIAG SPSTGINALT GEGLSDALEN TDVVIDLSNS 
PSFEEEPVIR FFETVGRNIL AAEILAGVKH HLILSIVGTH LLGNMGYMRA KMIQEDLVKK
SGLPYTIIRC TQFQEFVPAI AAGSTQGSEV LISGTDFQPI AAEDVAQFVS RFAVAEPAGG
IVEIAGPDRA PMSQFVKAYI EATGDPRTLV ANDRSEYFGA TVPQSALVPE GKALLGEIPF
AQYLQSLTAK V