Gene Dfer_5366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5366 
Symbol 
ID8228977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6484365 
End bp6485762 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content55% 
IMG OID644933211 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_003089724 
Protein GI255039103 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAATA TGTCTGTTTC AAAATCCAGT TTCCTGATCT CTGCTCCGTC GAGCAACTCG 
GGCAAGACCA CGCTGACGCT GGGATTGCTG CGGGCATTGC GCGACCGTGG GTTTGGTGTG
CAGCCGTTCA AATGCGGGCC CGATTATATC GATACCATCC ACCATACCAA TGCCGCCGGC
CGGCCGGGCG TGAACCTGGA TACGTTCATG GCTTCGGAGG CGCACATGCG GGCGGTATAC
GCGCATTATG CCTCGCAGGC GGACGTGAGC GTGGCCGAGG GCGTGATGGG GCTTTTCGAT
GGGGCCGACA AGATGAAAGG CAGCAGCGCG GAAATAGCGA CGTTGCTCGA TATTCCGGTG
GTGCTGGTGA TTAATGCGCA GTCGATGGCC TATTCCGCGG CGCCGCTCAT TTACGGGCTG
AAAAATTTCC ATGCGGGCAT TCGGGTCGTA GGCGCGATCT TCAATTTTGT GGGTACGGAA
TCGCATTACC GGTTTTTGCA GGATGCCTGC GCCGATGCTG GTGTGGAAGC CCTTGGCTAC
CTGCCCAGGA ACGAGGCGCT GCATATTCCT TCGCGGCATC TGGGCCTGCG TATTTCCACC
GAAACCAATT ACGAACAAAT TATCCGGCGG CTGGCGGAAG TTATCCCGCA GACGGTGGAT
CTTGATCGTT TGCTTGAAAT CACTTCCAGT AAGCATTCAA GTGACGATGC AGGAGCACTG
TCCGTTCAGG AAAAGATTTT AAATATTGAA AATCAAACTA TTGCATGGCC GCGTCAGTCC
CCGAAACTCC GCATTACAAT TGCACGGGAC GAGGCATTCT CTTTCCTATA CCATCAGAAT
GTGGAAACGC TGCGGGCATT TGGCGACGTG CAATGGTTCA GCCCGGTGCA TGACGCCGGT
TTACCCGAAA CCGACCTGCT TTACCTGCCC GGAGGCTATC CCGAACTGTT TGCGGAACAA
TTGTCGGGCA ACCAGTCCAT GCGCGATAGC ATACGCCAGT ATTGTGAAAA CGGCGGATTG
GCCTACGCGG AATGCGGCGG GCTGATGTAC CTCGGCAGGG AACTCATTGA TGACCATGGA
AATGCGTTCG AAATGGCCGG CGTGCTCGAT TGCGTTACTA CGCTCCAATA TTCGAAAATG
ACGCTGGGTT ACCGCACAAT GCGCTGGGAC GGGCTGGAAG TGAACGGCCA CGAGTTTCAC
TACTCCACTT TTAGAGAGAA TCCGCCGCAG GGGCCGCTCG CGCAAATGAC CAATGCGCGC
GGTGTGCCGG TGCCGACGCA GCTTTTTAAT GTGAAAAATA CATTCGCATC CTACACCCAC
TTCTACTGGG CCGATAAGCC GGAATTTATC CGGCACCTCA TCAACCAAAC CACCAAAAAA
GCAGAAAGCC GCCCATGA
 
Protein sequence
MVNMSVSKSS FLISAPSSNS GKTTLTLGLL RALRDRGFGV QPFKCGPDYI DTIHHTNAAG 
RPGVNLDTFM ASEAHMRAVY AHYASQADVS VAEGVMGLFD GADKMKGSSA EIATLLDIPV
VLVINAQSMA YSAAPLIYGL KNFHAGIRVV GAIFNFVGTE SHYRFLQDAC ADAGVEALGY
LPRNEALHIP SRHLGLRIST ETNYEQIIRR LAEVIPQTVD LDRLLEITSS KHSSDDAGAL
SVQEKILNIE NQTIAWPRQS PKLRITIARD EAFSFLYHQN VETLRAFGDV QWFSPVHDAG
LPETDLLYLP GGYPELFAEQ LSGNQSMRDS IRQYCENGGL AYAECGGLMY LGRELIDDHG
NAFEMAGVLD CVTTLQYSKM TLGYRTMRWD GLEVNGHEFH YSTFRENPPQ GPLAQMTNAR
GVPVPTQLFN VKNTFASYTH FYWADKPEFI RHLINQTTKK AESRP