| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5364 |
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| Symbol | |
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| ID | 8228975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6480750 |
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| End bp | 6482939 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933209 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089722 |
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| Protein GI | 255039101 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACCC TATTTTACCA GACGGCCCGC ATTTCCGCGG GCGGACTATT GCTCTCATTT
TTAGTCACTT CCATTGTTTC CGCGCAAGAA ACGGCTGCCG ATTCAACCGG CCGCAAAACG
CTTGATGCGG TGGTGGTGAC GGCCACACGC TTTGAAACCA AAAAAGAAAA GATCGCGCAG
AAGCTCGACC TTATTTCCAG GGAAGATGTC CAAATGACGC CCGCGAATGA CCTCACCGAC
ATCGTCAGGA AGACCGCGGC AGTAGATGTG ATCCAGTATC CCAACCTCTC TTCCGGCATC
GGCATCCGCG GTTTTCGGCC GCAATTTTCC GGTCTGAACC AGCGCACGCT GCTGCTGATA
GACGGCCGCC CCGCGGGGGC CACCAATCTT TCGCAGATCA ATTTGAATGG CATTGAGCGG
ATTGAAGTGC TGAAAGGCCC GGCGTCGTCG CTTTACGGCT CGCAGGCAAT GGGCGGGGTG
ATCAACGTCA TCACTAAACG CTCCAAAGGC GCTCCTTCCG GCAATGCGTT CCTGGAATAC
GGCAGTTTTA AAACCGTGCA GGCGGGGGTC AATACCGGCG GCAATATCAC ATCTAAACTC
GACTATGATC TGATTTTCAG CTATCTGGAA AGGTCGAAAG ATTATAAAAT CGGGGATGAT
AACTGGCTGC GGAATGCATT TGGCTATCAA CACGCGCAGA AAAACTACAC CGACCGCCCT
GTCGTGGAAA CCGACGAAAC GACCGGTGAC GGCGACCGGC GGCCATTCAC GAAACTGCAT
TATTTCTCGG GATCGCTGCG GCTGGGCTAT CAGCTTAGCG ACCGCTGGCG TGTGGATGCG
CGCGGCGAGC GGTTCCAGGC CGGGGATGTG GAGTCGCCGG GCGAACTGTC GTCGGGCAGT
ACGGAAGCCA GCACCAAAGA TGTGGACCGC CAGGCGCTGG ACGTTGCATT GACGGGCCAG
ATCGGGCAGC ACAGCCCGAG CGTAAAGGTT TATGCTTCGG AAGAAAACAC CCGGAACTAC
ACACAAAACG TCTCAGGCAA GCGGGTAATA CCGTTCCAAT CGGCGCAGGG CCACAATGCA
TGGAAAGGCG TGCAGGTGAA GGATGTCTGG AACCTGGGCC GGCATTCGGT GATATTGGGC
TACGACTACC TGCAAGCGTC CACCAACAGC CGCCGCTGGA CCAACGACAC CACCGAACGT
GCCCCGACGC AGCCGGAATA TGCGCTGATT TCGAGCGCAT TCTTCGGACA AGCCCTGCTG
AATATCGGTA ACCTTACCCT GCAACCGGGC ATTCGGCTGG ATCATATCAC GTTCGACGTG
CGCGAAACGC CGCTGCTGCC CAGCTACAAA GCCGGTAAGA AAACAACCCC GTTCACCAGC
CCGAGCCTGG GGGTTACGTA CGCGTTACGC CCATCGCTGC GCGTGAAGGC GAATATCGGC
CGCGCATTCG TGACCACCGA CGCGTACAGC GTGGCCGGCT ATAATGAAGT GCGCGATTCG
AAAGGCCGCA TTGCCGTCAC AGCAGGAAAT CCCGATTTGA AGAATGAGAG CAGCCTGAGC
TGGGACTTAG GGCTTGATTT CAACAAACCG AAATCCGGCT TCGCGGCCAG CGCGACGTTT
TATCAAACCA AAGTCAATAA CCGCATTGCC AAGATCATCA CCGTCGTGAA TGAGCCGCTG
GAAAACGGCG ACGTCATTAC CTCCCGCGCT TCGTTCGTGA ATGCTGCCGA CGCGGAAATT
ACCGGTCTCG AAACGGAACT GTCGTACGAT TTTGGTGCAA AAGCCGACTA TCGCTATTCA
TTAAGGGCAT TCTGGAACGG CAATTCAATT ATCAAGGCAA AGGAGCTGAT CGTGAGCACG
GATGCATCCG GGATTCGGCG CGACATTCAG AATGTGGCCC GGAATACCTT TAACTTCGGC
CTCGCTTACG ATAATATGAA GTGGCTGCAA CTGCGGCTTT CGGGCAGATC GGTGGGAACA
AGAAAGGACA TCGACTACAC CGATCCTATC AACCCGGAAA TCGAATATCC GCAATACATG
GTGCTCGATT TCGTGGCTCA GTTCCGGATT ACCGGCGGCC ACACCATCGC ATTGAAACTG
AACAATGTGA CCGACGAGAA TTACTACGAA AAACGCGGCT ACAACCTGCC GGGCCGGGCA
TTGTCGGTTC GGTATATGAA GAATTTCTGA
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| Protein sequence | MHTLFYQTAR ISAGGLLLSF LVTSIVSAQE TAADSTGRKT LDAVVVTATR FETKKEKIAQ
KLDLISREDV QMTPANDLTD IVRKTAAVDV IQYPNLSSGI GIRGFRPQFS GLNQRTLLLI
DGRPAGATNL SQINLNGIER IEVLKGPASS LYGSQAMGGV INVITKRSKG APSGNAFLEY
GSFKTVQAGV NTGGNITSKL DYDLIFSYLE RSKDYKIGDD NWLRNAFGYQ HAQKNYTDRP
VVETDETTGD GDRRPFTKLH YFSGSLRLGY QLSDRWRVDA RGERFQAGDV ESPGELSSGS
TEASTKDVDR QALDVALTGQ IGQHSPSVKV YASEENTRNY TQNVSGKRVI PFQSAQGHNA
WKGVQVKDVW NLGRHSVILG YDYLQASTNS RRWTNDTTER APTQPEYALI SSAFFGQALL
NIGNLTLQPG IRLDHITFDV RETPLLPSYK AGKKTTPFTS PSLGVTYALR PSLRVKANIG
RAFVTTDAYS VAGYNEVRDS KGRIAVTAGN PDLKNESSLS WDLGLDFNKP KSGFAASATF
YQTKVNNRIA KIITVVNEPL ENGDVITSRA SFVNAADAEI TGLETELSYD FGAKADYRYS
LRAFWNGNSI IKAKELIVST DASGIRRDIQ NVARNTFNFG LAYDNMKWLQ LRLSGRSVGT
RKDIDYTDPI NPEIEYPQYM VLDFVAQFRI TGGHTIALKL NNVTDENYYE KRGYNLPGRA
LSVRYMKNF
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