Gene Dfer_5344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5344 
Symbol 
ID8228955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6455464 
End bp6456639 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID644933189 
ProductPepSY-associated TM helix domain protein 
Protein accessionYP_003089702 
Protein GI255039081 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTG TCAAGCAAAT CAAAACCTGG TTCCTGATCC ACAAATGGAC GAGCCTGATC 
TGCACGGCCT TCCTGCTGAT GCTTTGCATC ACCGGCCTGC CGCTGATCTT CCATGAAGAA
ATCGAAGAAC TCGAAGGCAA GCCGCATCTG GCCAAACAGG TGCCGGCCGG CACGCCGCTG
GCCGGGCTCG ACAAGCGGGC GGAAACCGCA CAGGCCAAAT ATCCGCAAAA GGTGATCCGG
TACATTTATT GGGACGAACA CGAGCCGAAT ACCACCGCAT TCAGCCTTTC GGACTCGATT
GACGCTCCGC CGGATAACTT CACGACGGTG ATTGTGGACG ACCATACGGC GGAACTGCTC
GACGAGCCTA ATTACCAGGA AGGCTTCATG TACATCATGC TCCAATTGCA CGTGGATATG
TTCATGGGCA TCGGCGGCAA GCTGTTTCTG GGGCTCATGG GATTGCTGTT TGTGGCGGCC
ATCGTATCAG GCATTATGCT TTACGGGCCG ATTATGAAGC GTTTCGACTT TGGCATGATC
CGCTCGCAAC GGTCCACACG CCTGAAATGG CTCGACCTGC ATAACCTGCT GGGCGTGGTG
ACGATCGTTT GGGGAACGGT GGTAGGGCTA ACCGGCGTGA TCAACACGGC GTCGGAAATC
GTGCTGGGGC TTTGGCAAAT GGGGCAGCTT TCGGAAATGA CGGCGCCCTA CAAAAATGCC
GGGCCGCTCT CCGGCAAGCT CAGCTCGCTC GACCAGGCCA TGGCCACCGC CCGTAACAAA
GCGCCCGAAA TGGAGCCTTC GATCATCGCC TACCCGGGCA CGCCATTCAC CAGCAAACAC
CATTACGGCG TGTTTATGAA AGGCAACACA CCACTCACGA AGCGCATTAT CAAGCCGGCG
CTGATCGACG CCAAAAACGG CACGCTCACG GATATGCGCG ATATGCCGTG GTATGTCAAC
ACGCTCTTCG TTTCGCAGCC ATTGCATTTC GGCGACTACG GCGGGCTTCC GCTGAAAATC
ATCTGGGCGC TATTCGACAT CGCGACGATC GTGATCCTCG GCAGCGGGCT TTACTTATGG
TTTGCCCGAA ACAAAGCCAC CAAGGCACAT ATCAACCGAC TGAGCAAGAA CGACACGGAG
ATCCTGACCG TCATCGCCCA GAAAGAAAAT GCCTGA
 
Protein sequence
MSSVKQIKTW FLIHKWTSLI CTAFLLMLCI TGLPLIFHEE IEELEGKPHL AKQVPAGTPL 
AGLDKRAETA QAKYPQKVIR YIYWDEHEPN TTAFSLSDSI DAPPDNFTTV IVDDHTAELL
DEPNYQEGFM YIMLQLHVDM FMGIGGKLFL GLMGLLFVAA IVSGIMLYGP IMKRFDFGMI
RSQRSTRLKW LDLHNLLGVV TIVWGTVVGL TGVINTASEI VLGLWQMGQL SEMTAPYKNA
GPLSGKLSSL DQAMATARNK APEMEPSIIA YPGTPFTSKH HYGVFMKGNT PLTKRIIKPA
LIDAKNGTLT DMRDMPWYVN TLFVSQPLHF GDYGGLPLKI IWALFDIATI VILGSGLYLW
FARNKATKAH INRLSKNDTE ILTVIAQKEN A