Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5344 |
Symbol | |
ID | 8228955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6455464 |
End bp | 6456639 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644933189 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_003089702 |
Protein GI | 255039081 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCTG TCAAGCAAAT CAAAACCTGG TTCCTGATCC ACAAATGGAC GAGCCTGATC TGCACGGCCT TCCTGCTGAT GCTTTGCATC ACCGGCCTGC CGCTGATCTT CCATGAAGAA ATCGAAGAAC TCGAAGGCAA GCCGCATCTG GCCAAACAGG TGCCGGCCGG CACGCCGCTG GCCGGGCTCG ACAAGCGGGC GGAAACCGCA CAGGCCAAAT ATCCGCAAAA GGTGATCCGG TACATTTATT GGGACGAACA CGAGCCGAAT ACCACCGCAT TCAGCCTTTC GGACTCGATT GACGCTCCGC CGGATAACTT CACGACGGTG ATTGTGGACG ACCATACGGC GGAACTGCTC GACGAGCCTA ATTACCAGGA AGGCTTCATG TACATCATGC TCCAATTGCA CGTGGATATG TTCATGGGCA TCGGCGGCAA GCTGTTTCTG GGGCTCATGG GATTGCTGTT TGTGGCGGCC ATCGTATCAG GCATTATGCT TTACGGGCCG ATTATGAAGC GTTTCGACTT TGGCATGATC CGCTCGCAAC GGTCCACACG CCTGAAATGG CTCGACCTGC ATAACCTGCT GGGCGTGGTG ACGATCGTTT GGGGAACGGT GGTAGGGCTA ACCGGCGTGA TCAACACGGC GTCGGAAATC GTGCTGGGGC TTTGGCAAAT GGGGCAGCTT TCGGAAATGA CGGCGCCCTA CAAAAATGCC GGGCCGCTCT CCGGCAAGCT CAGCTCGCTC GACCAGGCCA TGGCCACCGC CCGTAACAAA GCGCCCGAAA TGGAGCCTTC GATCATCGCC TACCCGGGCA CGCCATTCAC CAGCAAACAC CATTACGGCG TGTTTATGAA AGGCAACACA CCACTCACGA AGCGCATTAT CAAGCCGGCG CTGATCGACG CCAAAAACGG CACGCTCACG GATATGCGCG ATATGCCGTG GTATGTCAAC ACGCTCTTCG TTTCGCAGCC ATTGCATTTC GGCGACTACG GCGGGCTTCC GCTGAAAATC ATCTGGGCGC TATTCGACAT CGCGACGATC GTGATCCTCG GCAGCGGGCT TTACTTATGG TTTGCCCGAA ACAAAGCCAC CAAGGCACAT ATCAACCGAC TGAGCAAGAA CGACACGGAG ATCCTGACCG TCATCGCCCA GAAAGAAAAT GCCTGA
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Protein sequence | MSSVKQIKTW FLIHKWTSLI CTAFLLMLCI TGLPLIFHEE IEELEGKPHL AKQVPAGTPL AGLDKRAETA QAKYPQKVIR YIYWDEHEPN TTAFSLSDSI DAPPDNFTTV IVDDHTAELL DEPNYQEGFM YIMLQLHVDM FMGIGGKLFL GLMGLLFVAA IVSGIMLYGP IMKRFDFGMI RSQRSTRLKW LDLHNLLGVV TIVWGTVVGL TGVINTASEI VLGLWQMGQL SEMTAPYKNA GPLSGKLSSL DQAMATARNK APEMEPSIIA YPGTPFTSKH HYGVFMKGNT PLTKRIIKPA LIDAKNGTLT DMRDMPWYVN TLFVSQPLHF GDYGGLPLKI IWALFDIATI VILGSGLYLW FARNKATKAH INRLSKNDTE ILTVIAQKEN A
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