Gene Dfer_5321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5321 
Symbol 
ID8228932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6422987 
End bp6424426 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content55% 
IMG OID644933166 
Productcytochrome c oxidase accessory protein CcoG 
Protein accessionYP_003089679 
Protein GI255039058 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.036939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0333556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGA AAGATGAGGT AGAAATGGAA ACGACAGATA TGAATGGCTT GGGGGGAAAG 
CAAAAAAGCC GACAGCCGAT TGCCGACAGC CGAAGTTTAA AATCAGAAAC ACGTCCCTTG
TACCCGCAAC GGCCCGAAGG TAAGTGGCAT AACCGCCGTG TGGCATTCAG CATAGCGATC
ATCGCGCTGC TGTTCATCGT TCCGTTCATC CGGATCGATG GGCAGCAGCT CGTGCTGTTG
AATGTGATTG AAAGGAAATT CATTGTTTTC GGTGTTTTTA TCGGGCCGCA GGACTACTGG
CTGTTCGGGC TTACGATGCT GTCGTTTTTC GTGTTCATCG TGCTGTTCAC GACGGTCTTC
GGTCGGTTAT GGTGTGGCTG GGCGTGCCCG CAGACGGTTT TTATGGAAAT GGTTTTCCGC
AAAATCGAAT ATGCCATTGA AGGCGACGCC GGTAAGCAGA AACTGCTGGA CAAAGCACCC
TGGACACCGG AAAAAATCAT GAAAAAGGGT TTGAAATACA CCCTCTTCCT GATCGTATCC
TTCGCCATTG CCAACCTGCT GCTCGCTTAT GTGCTGGGCA CGGATGAGTT GTCCAAAATC
ATTTCCGAAC CCATCGAAGC GCATATCGGC CTGTTTTCGG GCATTGTGCT TTTCACGGCG
GTTTTCTACT GGAACTTCGC CTGGCTGCGC GAGCAGGCGT GTACGGTGGT GTGCCCCTAC
GGCCGCCTGC AAAGTGTGCT GCTCGACCGC AACTCGATTA ACGTAGCCTA CGACCACGAG
CGCGGCGAAC CGCGCGGAAA GCTGCACAAA GGCTCCGACC GTACGGAAGG CGACTGTATC
AACTGCTTCC AATGCGTGGC CGTGTGCCCG ACGGGCATCG ACATCCGCAA CGGCACCCAG
ATGGAATGCG TAAACTGTAC CGCGTGCATC GACGCCTGCG ATGCGATCAT GGACAAGGTC
GGGTTCGACC GGGGGCTGAT CCGCTACACG TCCGAGAATG CCATTGTTAA GAAAACCACG
AAGGTAATCA CCCCGCGAAC GTGGGGCTAT GCGGCTGTGC TGGTGCTGCT CTGGTCGGCT
TTGGGATTTG TGGTGGCTAC GCGCACCGAT ACTCAGACCA CGCTGTTCCG CGCGCCCGGC
AGCCGCTACA TCGAAAACAG CGACGGCACG ATCAGCAACT TGTACACATT CAAGATATTC
AACAAAACCA ATCGCATCAT CAAACCCTCC ATTCGCCTCG ACTCCCCGCA CGGAAAGCTG
CTGTTCGCCG GGTCACCCGA CCTGACGCTC GACGCCGCGG GGATGTCCGA GGGGACCGTG
TTTGTGATTA TTCCAAAAAC GGAACTGAAA AGCCGCAAAA CGGTGGTAAA ACTATCCCTG
TCGCAGGGCG ACCGGCAGCT CGAAACGATC GAGACTACAT TTATCGCACC GGAAGAATAA
 
Protein sequence
MIRKDEVEME TTDMNGLGGK QKSRQPIADS RSLKSETRPL YPQRPEGKWH NRRVAFSIAI 
IALLFIVPFI RIDGQQLVLL NVIERKFIVF GVFIGPQDYW LFGLTMLSFF VFIVLFTTVF
GRLWCGWACP QTVFMEMVFR KIEYAIEGDA GKQKLLDKAP WTPEKIMKKG LKYTLFLIVS
FAIANLLLAY VLGTDELSKI ISEPIEAHIG LFSGIVLFTA VFYWNFAWLR EQACTVVCPY
GRLQSVLLDR NSINVAYDHE RGEPRGKLHK GSDRTEGDCI NCFQCVAVCP TGIDIRNGTQ
MECVNCTACI DACDAIMDKV GFDRGLIRYT SENAIVKKTT KVITPRTWGY AAVLVLLWSA
LGFVVATRTD TQTTLFRAPG SRYIENSDGT ISNLYTFKIF NKTNRIIKPS IRLDSPHGKL
LFAGSPDLTL DAAGMSEGTV FVIIPKTELK SRKTVVKLSL SQGDRQLETI ETTFIAPEE