Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5296 |
Symbol | |
ID | 8228907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6390735 |
End bp | 6393950 |
Gene Length | 3216 bp |
Protein Length | 1071 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644933141 |
Product | hypothetical protein |
Protein accession | YP_003089654 |
Protein GI | 255039033 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.774342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.228264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATGC ATAAGAGATT TTTACTCCCT ATTATCCTCA CATTGCTTTG CTGCTTCGGC AACATCGCTA TTCTGAGGGC ACAAACTACG CAGGCGTCGA TTTCCGGTAC GGTTACCGAT GACCAGAATG CAGAACTGGC CGGCGCGACC GTCCAGGTGA AAAACGAATC AACAGGCTTT ACAACAGGAA CCGTTACCAA CGCAAAAGGC GAATATGCCT TCCGTGAGCT CCCGCTCGGC GGTCCGTACA CCGTTACAGC GACTTACGTT GGTTTTGGCG AACAAAAACT GACCGGCTAC ATGCTCCACC AGGGAGACGC CGTGAAGGTT AAAATGAGCA TGAAAGACGC CGGTCAAACG CTTGAAGTTG TGAGCGTTGT GGCATCAGGT ATTAAAAATA AAATTGAAAA CCTGGGTGCC TCTACGGCCA TTTCGGCGCG GGATATTACC CGCCTGCCGG TAAACGGACG GAACTTCACC TCGCTGATGG ACCTTTCGCC ATTGAGCCGC GGCGGTAACA TTTCCGGTCA GCTGGGCTCT TCCACGGGCT ACACCATTGA CGGGATGAGC TCCAAAAACC CTACTTCCGC CGGTGCTACC ACCAGCCGAA GCGGCGCCCC ATACTCGATC TCGATCGAAG CGGTACGTGA GTTTCAGGTG ATTACCAACC AATACGACGT TACTTACGGA CGCAGCGGTG GCGGTACGAT CAGTGCCGTG ACGAAATCAG GTACGAACCA GCTAAGCGGT AGCGCATTCA ACTACACCCG CGCCGACTGG TTATCGAGCC CGTATGACAT TCGTGGAAAT AAAATCAATA ACAAATTCGC TACCAACCAG TTTGGCTTCT CCCTCGGCGG ACCTATCCTG AAAGACAAGC TGCACTTTTT CGTGGCCTGG GACCATCAGC AGGACAGCCG CCCGCTGATC ATTGCGGACA TTCTCAGCCC GGTTGATGAA AACCGTTTCA ACGTAACCCG TGCTACGCTC GATCAGTTTG TGAGCATCGC CCGCAGCAAG TACGGCATGG CCGACACCCA GCAGTTTGGA ACATTTGACA AAAAACGCGG CTCCGACGCG GCATTCCTCC GCCTCGACTG GCAGCTGAAC AACCGTAACC TGCTAACGAT TCGCAACAAC TACACCAACG ACCGCAACAA ACTGGGTCTG GCGGATAACA CCACGATCAA CTCGTACGAA TCTTACGGAA ACGACTTCAA CCAGGATAAC AGCTTGCTGG CATCGCTCCG CTCGACATTG AATTCCAAGG TGACCAACGA GCTGAAAGTG CAGCATTTGT TTGTAAAGCA AAAAAGTGCC CCCGGCGACC AGCTTCCCGA GGCCAACATT CCGAGAGCGA TCGTAGAAAA CGTCAATTCC GTGTTGAGCG ACGGTAATTC CCGCGCAACC AACATCCAGA TGGGTGGCCA CCGTTTCGCG CAGGAGCGGT TCACGAACCA TGTTCTTCAA TTGGTGGATA ACCTGTATTA CCACACCGAT AAAGTGGAAT ATACACTGGG CGCGGACATC ATGATGACCC GCTCGCATTC AACCTACGGC TCGGAGGTGA ACGGGCGCTT CCATTACAAT GTGGATGCAG CAGCGGGCAA AACGTCCCTC GACCAGTTCA GCGATCTGAA ACCTTACCGC TACTACCGCG AGGTGCCTTT GATGGACGAT TGGTCCGTAA AAGGAACGAT CTGGAATGCA GGCGTTTACG GACAATTGAA AACAAGGCTT GCCACTGGCC TGGACGTGGT GGCAGGTCTG CGCCTCGACT ACGCGCATTA CCCAAGCTCG CCGTTGAACC AGACTTTGTA TGACGCATTG CAGATCCGCA CCGATCACAA GATCAAGTCT TTTGTAGTGC AGCCGCGCGC GCAGTTCACC TGGGATGTGA ACGACAAGCA TACCGACATT TTCCGCCTCG GTGGTGGGGT ATTCGCCTCC GATATCAACA ACTACGTGGT TATCAACAAC CTGACATTCG ATGGAAAGCA CCTGGCGACC GTCGACGTAC GCAGCCCGAA CATCCCTACC CCGGATTTCG CCGCTTACCG CGCCAACTAC AACAGCATTC CGACATTGTC GCAATTCCAG CTGCCGACCA TCAACACCAA CGCGAAAGAC GCCCGCGTAC CGATCATTTA CAAGGCTAAT ATCTCCTACG CCAAGTACCT GACCGACAAG CTGAAAGTGG GTATCGCCGG ATACATGAGC CTCGGCCGCA ACAACTATAT GTATGTGGAC AGAAACATGG TAGATGAGCC CTTCTTTCGC CTTGCCAACG AAGGCAACCG CGGCGTGTAC GTTCCGGGTG GCGACCAAAT GCCGACCAAC GGAGCCGGCG ACTGGCTGAA AGGACGTAAA TCGACCCAGT TTGGCCGCGT GCTGGAACTG AACAGCCAGG GTAAAGTGAA TGCTTTCTCG ATGGTAGCCG ATGTGGAATA CGAATACTTC CGCGATGGAA AGATCACTTT GAGCTATACT TATAATGATG TGAAGGACAA CACATCGTTC AATGGTAACG TGGCCAACAG CGCAACACTT TCATTGCCGG TCCGCGACGA TCCGCGTAAC CTGGGACTGA TGTCATATTC CGACAACCAG TTCCGCCACA AAATTGTATT CTACGGCTCA CTACCCAGCT TTTGGGGCGT CAATGTCGGC GTTCGCTACT CGGGCATCGG CGGCACGCGC TACACCTTGC TCTCCGGCGG GAACACCAAT GGCGACTTCG TAGGTACCAA CGACCTGGCA TACATTTTCG ACAGAAACGA CCCGAGCGTG CCTGAAAACG TGCGCAATGG CCTGCAAGCC ATCCTCGACA ACCCCGGCGC CAGCCAGAGC ATCAAGGATT ACATTGTCAA AAACTCCGGC AAAATCGCGG AAAGAAACGG CGGTATCAAC GGATTCTACG GTGTATTCGA CGTTCGCGCC TCCAAACGCA TCAAAATCGC GGGCACACAC GCCATCGAAA TTTCGGCCGA CGTGTTCAAC TTTGCCAACT TCCTGAACAA GGAATGGGGC CGCAACAAAT CCCTGGGCAC GCAAGCGCTC TACGCGCTGG GTATCCCGGC TGCCAACGGC CAACCCGCCG TTGCCGCATT CGACAGAGCG AAAAACCAGT ACGTATACCG TGTAAACACA GCCGGTGTGG TAACGCCATC GGGCAACCCT TACCAGGTAC AGATTGGTTT GCGGTACAGT TTCTGA
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Protein sequence | MLMHKRFLLP IILTLLCCFG NIAILRAQTT QASISGTVTD DQNAELAGAT VQVKNESTGF TTGTVTNAKG EYAFRELPLG GPYTVTATYV GFGEQKLTGY MLHQGDAVKV KMSMKDAGQT LEVVSVVASG IKNKIENLGA STAISARDIT RLPVNGRNFT SLMDLSPLSR GGNISGQLGS STGYTIDGMS SKNPTSAGAT TSRSGAPYSI SIEAVREFQV ITNQYDVTYG RSGGGTISAV TKSGTNQLSG SAFNYTRADW LSSPYDIRGN KINNKFATNQ FGFSLGGPIL KDKLHFFVAW DHQQDSRPLI IADILSPVDE NRFNVTRATL DQFVSIARSK YGMADTQQFG TFDKKRGSDA AFLRLDWQLN NRNLLTIRNN YTNDRNKLGL ADNTTINSYE SYGNDFNQDN SLLASLRSTL NSKVTNELKV QHLFVKQKSA PGDQLPEANI PRAIVENVNS VLSDGNSRAT NIQMGGHRFA QERFTNHVLQ LVDNLYYHTD KVEYTLGADI MMTRSHSTYG SEVNGRFHYN VDAAAGKTSL DQFSDLKPYR YYREVPLMDD WSVKGTIWNA GVYGQLKTRL ATGLDVVAGL RLDYAHYPSS PLNQTLYDAL QIRTDHKIKS FVVQPRAQFT WDVNDKHTDI FRLGGGVFAS DINNYVVINN LTFDGKHLAT VDVRSPNIPT PDFAAYRANY NSIPTLSQFQ LPTINTNAKD ARVPIIYKAN ISYAKYLTDK LKVGIAGYMS LGRNNYMYVD RNMVDEPFFR LANEGNRGVY VPGGDQMPTN GAGDWLKGRK STQFGRVLEL NSQGKVNAFS MVADVEYEYF RDGKITLSYT YNDVKDNTSF NGNVANSATL SLPVRDDPRN LGLMSYSDNQ FRHKIVFYGS LPSFWGVNVG VRYSGIGGTR YTLLSGGNTN GDFVGTNDLA YIFDRNDPSV PENVRNGLQA ILDNPGASQS IKDYIVKNSG KIAERNGGIN GFYGVFDVRA SKRIKIAGTH AIEISADVFN FANFLNKEWG RNKSLGTQAL YALGIPAANG QPAVAAFDRA KNQYVYRVNT AGVVTPSGNP YQVQIGLRYS F
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